CF504065

Overview
NameCF504065
Unique NameCF504065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: HAGHL_CHICK (Hydroxyacylglutathione hydrolase-like protein OS=Gallus gallus GN=HAGHL PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.659e-18
Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHTK 365
            MK+  I  LEDNY YL+IEE+T++A  VD   P++++E  ++              WDHA GNE++  + PG++VYG   + +   TH+V   ++ + GA + V  L TPCHTK
Sbjct:    1 MKVKVISVLEDNYMYLVIEESTRDAVAVDAAVPKRLLEIVRKEDVVLRAVLITHHHWDHARGNEELVRLCPGLRVYGAD-ERIGALTHRVAPDEELTFGA-IRVRCLFTPCHTK 112          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: GLO21_SCHPO (Probable hydroxyacylglutathione hydrolase C824.07 OS=Schizosaccharomyces pombe GN=SPAC824.07 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.929e-15
Identity = 45/108 (41.67%), Postives = 59/108 (54.63%), Query Frame = 3
Query:   54 DNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQ----XXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHTK 365
            +NYAYL+  + TK  A+VDP EPE +I   K+                  +DHAGGNE I    P +KVYGG   N  G T+  ++ + F +G  V V ALHTPCHT+
Sbjct:   16 NNYAYLLTCDKTKITAIVDPAEPESVIPVIKEKTAKKEIDLQYILTTHHHYDHAGGNEDILSYFPSLKVYGGK--NASGVTYTPKDKEIFKVG-EVQVEALHTPCHTQ 120          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: HAGHL_BOVIN (Hydroxyacylglutathione hydrolase-like protein OS=Bos taurus GN=HAGHL PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.113e-14
Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHT 362
            MK+  IP LEDNY YL+IEE T+EA  VD   P++++E   +              WDHA GN ++  ++PG+ V G   + +   T ++ +G++   GA ++V  L TP HT
Sbjct:    1 MKVKVIPVLEDNYMYLVIEERTREAVAVDVAVPKRLLEIVGRERVSLTTVLTTHHHWDHARGNAELARLLPGLVVLGAD-ERICALTRRLAHGEELRFGA-IHVRCLLTPGHT 111          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: HAGHL_MOUSE (Hydroxyacylglutathione hydrolase-like protein OS=Mus musculus GN=Haghl PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.454e-14
Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHT 362
            MK+  IP LEDNY YLIIEE T+EA  +D    E+++E A +              WDH  GN ++  ++PG+ V G   + +   T ++E+G+    GA ++V  L TP HT
Sbjct:    1 MKVKVIPVLEDNYMYLIIEEHTREAVAIDVAVAERLLEIAGREGVSLTMVLSTHHHWDHTRGNAELAHILPGLAVLGAD-ERICALTRRLEHGEGLQFGA-IHVRCLLTPGHT 111          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: HAGHL_HUMAN (Hydroxyacylglutathione hydrolase-like protein OS=Homo sapiens GN=HAGHL PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.479e-14
Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHT 362
            MK+  IP LEDNY YL+IEE T+EA  VD   P++++E   +              WDHA GN ++  + PG+ V G   + +   T ++ +G++   GA ++V  L TP HT
Sbjct:    1 MKVKVIPVLEDNYMYLVIEELTREAVAVDVAVPKRLLEIVGREGVSLTAVLTTHHHWDHARGNPELARLRPGLAVLGAD-ERIFSLTRRLAHGEELRFGA-IHVRCLLTPGHT 111          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: GLO2N_ARATH (Hydroxyacylglutathione hydrolase 2, mitochondrial OS=Arabidopsis thaliana GN=At2g31350 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.231e-13
Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSL--DNVKGCTHQVENGDKFSIGAHVNVLALHTPCHTK 365
            ++I  +PCL+DNYAY++ +E T    VVDP E E II++ K+              +DH GGN ++K+   G KV G ++  D + G    +++GDK+    H  V  + TP HTK
Sbjct:   71 LQIELVPCLKDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRY-GAKVIGSAMDKDRIPGIDMALKDGDKWMFAGH-EVHVMDTPGHTK 184          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: GLO22_SCHPO (Probable hydroxyacylglutathione hydrolase C13B11.03c OS=Schizosaccharomyces pombe GN=SPCC13B11.03c PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.741e-13
Identity = 40/109 (36.70%), Postives = 62/109 (56.88%), Query Frame = 3
Query:   51 EDNYAYLIIEETTKEAAVVDPVEPEKII----EAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHTK 365
            +DNYAYL++ E T++AA+VDP E   ++    +  K                DH+GGN  +K+  P + +YGGS  N  G +H +++ +   IG +V + ALHTPCHT+
Sbjct:   15 QDNYAYLLLCEETRQAAIVDPAEVNVVMPILKKKLKNKEIDLQAILTTHHHADHSGGNLNLKKEFPHVTIYGGSDQN--GVSHVLQDKETLRIG-NVQIEALHTPCHTR 120          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: PNKD_BOVIN (Probable hydrolase PNKD OS=Bos taurus GN=PNKD PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.107e-13
Identity = 37/114 (32.46%), Postives = 59/114 (51.75%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHTK 365
            +K+  IP L DNY+YLII+   + A  VDP +P+ +  + ++              WDH+GGN  +       +VYG   D++   TH + + D  S+G  + + AL TP HT+
Sbjct:  119 VKVLPIPVLSDNYSYLIIDTQARLAVAVDPSDPQAVQASIEKEGVNLVAILCTHKHWDHSGGNRDLSRRHQDCRVYGSPQDSIPYLTHPLCHQDVVSVG-RLQIRALATPGHTQ 231          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: GLO2_DICDI (Hydroxyacylglutathione hydrolase OS=Dictyostelium discoideum GN=hagh PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.107e-13
Identity = 40/115 (34.78%), Postives = 59/115 (51.30%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAK--QXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHT 362
            MK+  +   +DNY+YL+I+E  K A  +DP EP K+I +                   WDHAGGN  IK ++  I VYG   +  +G T ++EN +   IG+ + +  L  P HT
Sbjct:    1 MKVQPVLVNKDNYSYLVIDEKNKVAIAIDPCEPNKVISSLSSISSDIKINSVFTTHHHWDHAGGNNLIKTIIKDINVYGRD-ERFEGITKKLENNEVLKIGS-LKIKTLDAPAHT 113          
BLAST of CF504065 vs. ExPASy Swiss-Prot
Match: PNKD_HUMAN (Probable hydrolase PNKD OS=Homo sapiens GN=PNKD PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.321e-12
Identity = 37/114 (32.46%), Postives = 57/114 (50.00%), Query Frame = 3
Query:   24 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLALHTPCHTK 365
            +K+  IP L DNY+YLII+   + A  VDP +P  +  + ++              WDH+GGN  +       +VYG   D +   TH + + D  S+G  + + AL TP HT+
Sbjct:  119 VKVLPIPVLSDNYSYLIIDTQAQLAVAVDPSDPRAVQASIEKEGVTLVAILCTHKHWDHSGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVG-RLQIRALATPGHTQ 231          
The following BLAST results are available for this feature:
BLAST of CF504065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
HAGHL_CHICK1.659e-1838.60Hydroxyacylglutathione hydrolase-like protein OS=G... [more]
GLO21_SCHPO2.929e-1541.67Probable hydroxyacylglutathione hydrolase C824.07 ... [more]
HAGHL_BOVIN1.113e-1436.28Hydroxyacylglutathione hydrolase-like protein OS=B... [more]
HAGHL_MOUSE1.454e-1437.17Hydroxyacylglutathione hydrolase-like protein OS=M... [more]
HAGHL_HUMAN2.479e-1436.28Hydroxyacylglutathione hydrolase-like protein OS=H... [more]
GLO2N_ARATH1.231e-1336.21Hydroxyacylglutathione hydrolase 2, mitochondrial ... [more]
GLO22_SCHPO2.741e-1336.70Probable hydroxyacylglutathione hydrolase C13B11.0... [more]
PNKD_BOVIN6.107e-1332.46Probable hydrolase PNKD OS=Bos taurus GN=PNKD PE=2... [more]
GLO2_DICDI6.107e-1334.78Hydroxyacylglutathione hydrolase OS=Dictyostelium ... [more]
PNKD_HUMAN2.321e-1232.46Probable hydrolase PNKD OS=Homo sapiens GN=PNKD PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-553 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504065 ID=CF504065; Name=CF504065; organism=Citrus sinensis; type=EST; length=366bp
GTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTGTTTG
GAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAGCTGC
AGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAACAAC
ACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGACCAT
GCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGGTGTA
TGGGGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAAATG
GTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGGCTCTTCACACG
CCTTGCCATACCAAAG
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