CF504073
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 4.255e-36 Identity = 69/96 (71.88%), Postives = 79/96 (82.29%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTP 319 MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVTI+ET YV+TP Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETP 96 HSP 2 Score: 25.0238 bits (53), Expect = 4.255e-36 Identity = 8/15 (53.33%), Postives = 13/15 (86.67%), Query Frame = 3 Query: 318 PRGLRSLNTVWAQHL 362 PRGLR+ T++A+H+ Sbjct: 96 PRGLRTFKTIFAEHI 110
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3_NEUCR (60S ribosomal protein L3 OS=Neurospora crassa GN=rpl-3 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.597e-35 Identity = 64/96 (66.67%), Postives = 75/96 (78.12%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTP 319 MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+++PG+K HKKE EAVTII+T Y++TP Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDLDRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETP 96 HSP 2 Score: 32.7278 bits (73), Expect = 1.597e-35 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 318 PRGLRSLNTVWAQHL 362 PRGLRSL TVWA+HL Sbjct: 96 PRGLRSLTTVWAEHL 110
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3_CANGA (60S ribosomal protein L3 OS=Candida glabrata GN=RPL3 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.016e-34 Identity = 63/96 (65.62%), Postives = 75/96 (78.12%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTP 319 MSHRK+E PRHG LGFLPRKRAA RG+VK+FPKDD SKP LT+FLGYKAGMT IVRD+++PGSK HK+E EAVT+++T YV+TP Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETP 96 HSP 2 Score: 32.7278 bits (73), Expect = 1.016e-34 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 318 PRGLRSLNTVWAQHL 362 PRGLRSL TVWA+HL Sbjct: 96 PRGLRSLTTVWAEHL 110
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.723e-34 Identity = 62/96 (64.58%), Postives = 75/96 (78.12%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTP 319 MSHRK+E PRHG LGFLPRKRAA RG+VKAFPKDD SKP LT+FLGYKAGMT IVRD+++PGSK HK+E EAV++++T Y++TP Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKAFPKDDKSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREIVEAVSVVDTPPMVVVGVVGYIETP 96 HSP 2 Score: 32.7278 bits (73), Expect = 1.723e-34 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 318 PRGLRSLNTVWAQHL 362 PRGLRSL TVWA+HL Sbjct: 96 PRGLRSLTTVWAEHL 110
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4) HSP 1 Score: 132.494 bits (332), Expect = 2.244e-34 Identity = 63/96 (65.62%), Postives = 74/96 (77.08%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTP 319 MSHRK+E PRHG LGFLPRKRAA R +VKAFPKDD SKP LT+FLGYKAGMT IVRD+++PGSK HK+E EAVT+++T YV+TP Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETP 96 HSP 2 Score: 32.7278 bits (73), Expect = 2.244e-34 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 318 PRGLRSLNTVWAQHL 362 PRGLRSL TVWA+HL Sbjct: 96 PRGLRSLTTVWAEHL 110
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3_DROME (60S ribosomal protein L3 OS=Drosophila melanogaster GN=RpL3 PE=1 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 4.954e-34 Identity = 62/96 (64.58%), Postives = 75/96 (78.12%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTP 319 MSHRKF PRHGS+ F P+KR+ARHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+ ++PGSK++KKE EAVT++ET Y++TP Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETP 96 HSP 2 Score: 26.5646 bits (57), Expect = 4.954e-34 Identity = 11/15 (73.33%), Postives = 12/15 (80.00%), Query Frame = 3 Query: 318 PRGLRSLNTVWAQHL 362 P GLR+L VWAQHL Sbjct: 96 PFGLRALVNVWAQHL 110
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3_DICDI (60S ribosomal protein L3 OS=Dictyostelium discoideum GN=rpl3 PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 4.957e-34 Identity = 66/95 (69.47%), Postives = 76/95 (80.00%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKT 316 MSHRKFE PRHG+LGF PRKRAARH+GKVK+FPKDD ++ LTAF+GYKAGMTH+VRD+EKPGSK+HKKE EAVTIIE YV+T Sbjct: 1 MSHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDLEKPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVET 95 HSP 2 Score: 25.409 bits (54), Expect = 4.957e-34 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 321 RGLRSLNTVWAQHL 362 +GL++ TVWAQHL Sbjct: 97 QGLKTYKTVWAQHL 110
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3_KLULA (60S ribosomal protein L3 OS=Kluyveromyces lactis GN=RPL3 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.959e-34 Identity = 61/96 (63.54%), Postives = 75/96 (78.12%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTP 319 MSHRK+E PRHG LGFLPRKRAA RG+VK+FPKDD +KP LT+FLGYKAGM+ IVRD+++PGSK HK+E EAVT+++T YV+TP Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDLDRPGSKFHKREVVEAVTVVDTPPIVVVGVVGYVETP 96 HSP 2 Score: 32.7278 bits (73), Expect = 4.959e-34 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 318 PRGLRSLNTVWAQHL 362 PRGLRSL TVWA+HL Sbjct: 96 PRGLRSLTTVWAEHL 110
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.959e-34 Identity = 61/96 (63.54%), Postives = 75/96 (78.12%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTP 319 MSHRK+E PRHGSLGFLPRKR+A RG+VK+FPKD SKP LTAFLGYKAGMT +VRD+++PGSK+HK+E EA T+++T YV+TP Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRSANIRGRVKSFPKDVKSKPVALTAFLGYKAGMTTVVRDLDRPGSKMHKREIVEAATVVDTPPLVVVGVVGYVETP 96 HSP 2 Score: 32.7278 bits (73), Expect = 4.959e-34 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 318 PRGLRSLNTVWAQHL 362 PRGLRSL TVWA+HL Sbjct: 96 PRGLRSLTTVWAEHL 110
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3_TOXCA (60S ribosomal protein L3 OS=Toxocara canis GN=RPL3 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 6.455e-34 Identity = 63/96 (65.62%), Postives = 74/96 (77.08%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTP 319 MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP LTAF+ +KAGMTHIVR+V+KPGSK++KKE EAVTI E Y+ TP Sbjct: 1 MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPTKPIHLTAFIAFKAGMTHIVREVDKPGSKVNKKEVVEAVTIFEAPPMVIVGIVGYIDTP 96 HSP 2 Score: 26.9498 bits (58), Expect = 6.455e-34 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 3 Query: 318 PRGLRSLNTVWAQHL 362 PRG R TVWA+HL Sbjct: 96 PRGPRQFKTVWAEHL 110 The following BLAST results are available for this feature:
BLAST of CF504073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504073 ID=CF504073; Name=CF504073; organism=Citrus sinensis; type=EST; length=362bpback to top |