CF504073
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3_CAEEL (60S ribosomal protein L3 OS=Caenorhabditis elegans GN=rpl-3 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 8.409e-34 Identity = 64/96 (66.67%), Postives = 74/96 (77.08%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTP 319 MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV+KPGSK++KKE EAVTI+ET YV TP Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTP 96 HSP 2 Score: 26.9498 bits (58), Expect = 8.409e-34 Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = 3 Query: 318 PRGLRSLNTVWAQHL 362 P+G R+L T+WA+HL Sbjct: 96 PQGPRALTTIWAEHL 110
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3_CAEBR (60S ribosomal protein L3 OS=Caenorhabditis briggsae GN=rpl-3 PE=3 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 2.419e-33 Identity = 63/96 (65.62%), Postives = 74/96 (77.08%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTP 319 MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV+KPGSK++KKE EAV+IIET Y+ TP Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTP 96 HSP 2 Score: 26.9498 bits (58), Expect = 2.419e-33 Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = 3 Query: 318 PRGLRSLNTVWAQHL 362 P+G R+L T+WA+HL Sbjct: 96 PQGPRALTTIWAEHL 110
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3L_HUMAN (60S ribosomal protein L3-like OS=Homo sapiens GN=RPL3L PE=1 SV=3) HSP 1 Score: 130.183 bits (326), Expect = 5.758e-32 Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTP 319 MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V +PG K+ K+E EAVTI+ET YV TP Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATP 96 HSP 2 Score: 26.9498 bits (58), Expect = 5.758e-32 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 3 Query: 318 PRGLRSLNTVWAQHL 362 PRGLRS T++A+HL Sbjct: 96 PRGLRSFKTIFAEHL 110
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3L_BOVIN (60S ribosomal protein L3-like OS=Bos taurus GN=RPL3L PE=2 SV=3) HSP 1 Score: 130.183 bits (326), Expect = 5.758e-32 Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTP 319 MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V +PG K+ K+E EAVTI+ET YV TP Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATP 96 HSP 2 Score: 26.9498 bits (58), Expect = 5.758e-32 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 3 Query: 318 PRGLRSLNTVWAQHL 362 PRGLRS T++A+HL Sbjct: 96 PRGLRSFKTIFAEHL 110
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3_ENCCU (60S ribosomal protein L3 OS=Encephalitozoon cuniculi GN=RPL3-1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.010e-15 Identity = 45/96 (46.88%), Postives = 55/96 (57.29%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVR-DVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKT 316 MS RKF PRHGSL F PRKR+ R AFP DD S+P LT F+ YKAGMTH+VR + +K +E +AVT++E Y KT Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTKTQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKT 96
BLAST of CF504073 vs. ExPASy Swiss-Prot
Match: RL3_AERPE (50S ribosomal protein L3P OS=Aeropyrum pernix GN=rpl3p PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.107e-13 Identity = 42/81 (51.85%), Postives = 51/81 (62.96%), Query Frame = 2 Query: 32 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIET 274 M RK PR GSLGF PRKRA+R +VK +P+ D KP L AFLGY+AGMTH+ ++PG KE VTI+ET Sbjct: 1 MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVDDRPGRPTSGKEIFVPVTIVET 80 The following BLAST results are available for this feature:
BLAST of CF504073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504073 ID=CF504073; Name=CF504073; organism=Citrus sinensis; type=EST; length=362bpback to top |