CF504078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH3A_CAEEL (Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Caenorhabditis elegans GN=F43G9.1 PE=1 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 3.457e-32 Identity = 60/98 (61.22%), Postives = 82/98 (83.67%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEG 341 F YA+ +GR+ V+A+HKANIM+++DGLFL CRE A YP+I ++E +D C+ +V++P+ +DVLVMPNLYGDI+SDLCAGL+GGLG+TPS NIG+G Sbjct: 177 FEYARQNGRKVVTAVHKANIMRQSDGLFLSICREQAALYPDIKFKEAYLDTVCLNMVQDPSQYDVLVMPNLYGDILSDLCAGLVGGLGVTPSGNIGKG 274
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH3A_RAT (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus GN=Idh3a PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 7.533e-32 Identity = 62/105 (59.05%), Postives = 83/105 (79.05%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEA 362 F YA+ + R V+A+HKANIM+ +DGLFL+ CREVAE +I + E+ +D C+ +V++P+ FDVLVMPNLYGDI+SDLCAGLIGGLG+T S NIG G+A+ E+ Sbjct: 184 FEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREVAENCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTQSGNIGANGVAIFES 288 HSP 2 Score: 21.557 bits (44), Expect = 7.533e-32 Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 2 Query: 2 KIITRQASLRVAEYA 46 K+IT AS R+AE+A Sbjct: 169 KLITEGASKRIAEFA 183
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDHB_DICDI (Isocitrate dehydrogenase [NAD] regulatory subunit B, mitochondrial OS=Dictyostelium discoideum GN=idhB PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.926e-31 Identity = 57/100 (57.00%), Postives = 79/100 (79.00%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGI 347 F YAK +GR++V+A+HKANI ++TDGLFL C ++A++YPEI +E +IDNCCM LVK+P +DV+V PNLYG+I+S++ A L+GG GL N+GEG I Sbjct: 178 FEYAKANGRKKVTAVHKANIQKQTDGLFLATCTQIAKEYPEIKFENTIIDNCCMQLVKSPEQYDVMVTPNLYGNIVSNIGAALVGGPGLAGGANVGEGSI 277
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH3B_RAT (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus GN=Idh3B PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.112e-30 Identity = 59/91 (64.84%), Postives = 73/91 (80.22%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTP 320 F YA GR +V+A+HKANIM+ DGLFL+CC EVAE YP+I +E ++IDNCCM LV+NP FDVLVMPNLYG+II +L AGL+GG G+ P Sbjct: 202 FDYATKKGRSKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVP 292
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH3B_MACFA (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Macaca fascicularis GN=IDH3B PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 1.112e-30 Identity = 59/91 (64.84%), Postives = 73/91 (80.22%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTP 320 F YA GR +V+A+HKANIM+ DGLFL+CC EVAE YP+I +E ++IDNCCM LV+NP FDVLVMPNLYG+II +L AGL+GG G+ P Sbjct: 202 FDYATKKGRSKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVP 292
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH3B_BOVIN (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Bos taurus GN=IDH3B PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 1.112e-30 Identity = 59/91 (64.84%), Postives = 74/91 (81.32%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTP 320 F YA GR +V+A+HKANIM+ DGLFL+CC EVAE YP+I +E+++IDNCCM LV+NP FDVLVMPNLYG+II +L AGL+GG G+ P Sbjct: 202 FDYATKKGRGKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFEKMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVP 292
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH3B_HUMAN (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Homo sapiens GN=IDH3B PE=1 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 1.897e-30 Identity = 59/91 (64.84%), Postives = 73/91 (80.22%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTP 320 F YA GR +V+A+HKANIM+ DGLFL+CC EVAE YP+I +E ++IDNCCM LV+NP FDVLVMPNLYG+II +L AGL+GG G+ P Sbjct: 202 FDYATKKGRGKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVP 292
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH3B_PONAB (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Pongo abelii GN=IDH3B PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.477e-30 Identity = 59/91 (64.84%), Postives = 72/91 (79.12%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTP 320 F YA GR +V A+HKANIM+ DGLFL+CC EVAE YP+I +E ++IDNCCM LV+NP FDVLVMPNLYG+II +L AGL+GG G+ P Sbjct: 202 FDYATKKGRSKVIAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVP 292
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH1_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Arabidopsis thaliana GN=IDH1 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 1.229e-29 Identity = 54/96 (56.25%), Postives = 74/96 (77.08%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG 335 F YA + R++V+A+HKANIM+ DGLFL+ CREVA+KYP ITY E+++DNCCM LV P FDV+V PNLYG+++++ AG+ GG G+ P N+G Sbjct: 185 FEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPSITYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVG 280
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: IDH3G_BOVIN (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Bos taurus GN=IDH3G PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.739e-29 Identity = 55/96 (57.29%), Postives = 75/96 (78.12%), Query Frame = 3 Query: 48 FHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIG 335 F A+ GR++V+A+HKANIM+ DGLFL+CCREVA +YP+IT+E +++DN M LV P FDV+VMPNLYG+I++++CAGL+GG GL N G Sbjct: 204 FQLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYG 299 The following BLAST results are available for this feature:
BLAST of CF504078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 287
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504078 ID=CF504078; Name=CF504078; organism=Citrus sinensis; type=EST; length=363bpback to top |