CF504078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_VIBCH (3-isopropylmalate dehydrogenase OS=Vibrio cholerae GN=leuB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.473e-16 Identity = 38/96 (39.58%), Postives = 65/96 (67.71%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R++V +I KAN++Q + L+ + E+A++YP+++ + IDN M L+K+PA FDV++ N++GDI+SD CA + G +G+ PS ++ E L E Sbjct: 188 RKKVCSIDKANVLQSSI-LWREVVSEIAKEYPDVSLSHMYIDNATMQLIKDPAQFDVMLCSNIFGDILSDECAMITGSMGMLPSASMNESKFGLYE 282
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_SODGM (3-isopropylmalate dehydrogenase OS=Sodalis glossinidius (strain morsitans) GN=leuB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.473e-16 Identity = 39/96 (40.62%), Postives = 63/96 (65.62%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R +V++I KAN++Q + L+ K +VA YP++ + IDN M L+K+P+ FDV++ NL+GDI+SD CA + G +G+ PS ++ E G + E Sbjct: 188 RGKVTSIDKANVLQSSI-LWRKVVSQVAPDYPDVALSHLYIDNATMQLIKDPSQFDVMLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGMYE 282
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_ERWCT (3-isopropylmalate dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=leuB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.473e-16 Identity = 43/106 (40.57%), Postives = 67/106 (63.21%), Query Frame = 3 Query: 51 HYAKTHGRER---VSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 H A R+R V++I KAN++Q + L+ + EVA+ YP++ + IDN M L+K+P+ FDV++ NL+GDI+SD CA + G +G+ PS ++ E G L E Sbjct: 177 HIAFESARKRRSIVTSIDKANVLQSSI-LWREIVTEVAKAYPDVKLSHLYIDNATMQLIKDPSQFDVMLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_BACSK (3-isopropylmalate dehydrogenase OS=Bacillus clausii (strain KSM-K16) GN=leuB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.536e-16 Identity = 39/109 (35.78%), Postives = 71/109 (65.14%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 +++ F +A+T ++RV ++ KAN+++ + L+ + EVA +YP++T +++DN M L+++P FDV+V NL+GDI+SD + + G LGL PS ++ + L E Sbjct: 171 IVHQAFQFARTR-KKRVVSVDKANVLESSR-LWREIADEVAREYPDVTLSHMLVDNAAMQLIRDPRQFDVIVTENLFGDILSDEASMITGSLGLLPSASMNTSKVGLFE 277
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_YERPS (3-isopropylmalate dehydrogenase OS=Yersinia pseudotuberculosis GN=leuB PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.924e-16 Identity = 39/96 (40.62%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R +V++I KAN++Q + L+ + +A YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E Sbjct: 187 RSKVTSIDKANVLQSSI-LWREVVNGIAADYPDVALSHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_YERPE (3-isopropylmalate dehydrogenase OS=Yersinia pestis GN=leuB PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.924e-16 Identity = 39/96 (40.62%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R +V++I KAN++Q + L+ + +A YP++ + IDN M L+K+P+ FDVL+ NL+GDI+SD CA + G +G+ PS ++ E G L E Sbjct: 187 RSKVTSIDKANVLQSSI-LWREVVNGIAADYPDVALSHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYE 281
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_VIBVU (3-isopropylmalate dehydrogenase OS=Vibrio vulnificus GN=leuB PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.924e-16 Identity = 39/96 (40.62%), Postives = 63/96 (65.62%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 R++V +I KAN++Q + L+ + E+A+ YP++ + IDN M L+K+PA FDV++ N++GDIISD CA + G +G+ PS ++ E L E Sbjct: 188 RKKVCSIDKANVLQSSI-LWREVVEELAKDYPDVELSHMYIDNATMQLIKDPAQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNESKFGLYE 282
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_DESVH (3-isopropylmalate dehydrogenase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=leuB PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.924e-16 Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 3 Query: 72 RERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 + RV ++ KAN++ T L+ + EVA YP++ + +DN M LV+ PA FDV+V NL+GDI+SD A + G +G+ PS ++G GG AL E Sbjct: 184 KRRVCSVDKANVLA-TSRLWREVVEEVARDYPDVELSHMYVDNAAMQLVRWPAQFDVIVTGNLFGDILSDEAAVITGSIGMLPSASMGSGGPALFE 278
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_VIBF1 (3-isopropylmalate dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=leuB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.737e-16 Identity = 39/95 (41.05%), Postives = 62/95 (65.26%), Query Frame = 3 Query: 75 ERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 + V +I KAN++Q + L+ + EVA+ YP++T + IDN M L+K+P+ FDV++ N++GDIISD CA + G +G+ PS ++ E L E Sbjct: 189 KNVYSIDKANVLQSSI-LWREVVEEVAKGYPDVTLNHMYIDNATMQLIKDPSQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNESNFGLYE 282
BLAST of CF504078 vs. ExPASy Swiss-Prot
Match: LEU3_BUCDN (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Diuraphis noxia GN=leuB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.737e-16 Identity = 39/109 (35.78%), Postives = 70/109 (64.22%), Query Frame = 3 Query: 33 LLNMPFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPAAFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAE 359 + ++ F A++ + ++ +I KAN+++ + L+ + EV+++YP++ + IDN CM ++K+P FDVL+ NL+GDIISD CA + G +G+ PS ++ E L E Sbjct: 175 IAHLAFKLARSR-KHKLCSIDKANVLESSI-LWREVVEEVSKEYPDVILSHLYIDNVCMQIIKDPNQFDVLLCSNLFGDIISDECAMITGSIGMLPSASLNEKNFGLYE 281 The following BLAST results are available for this feature:
BLAST of CF504078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 287
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504078 ID=CF504078; Name=CF504078; organism=Citrus sinensis; type=EST; length=363bpback to top |