CF504079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_ANTMA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Antirrhinum majus GN=GAPC PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.466e-22 Identity = 49/54 (90.74%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 163 VSTDFVGDSRSSIFDAKAGIAL+ FVKLVSWYDNEWGYSTRVVDLIVHMA Q Sbjct: 284 VSTDFVGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTRVVDLIVHMASVQ 337
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_PINSY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pinus sylvestris GN=GAPC PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.615e-21 Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 163 VSTDF+GDSRSSIFDA+AGIALS FVKLVSWYDNEWGYS+RVVDLIVHMA TQ Sbjct: 287 VSTDFIGDSRSSIFDAQAGIALSDNFVKLVSWYDNEWGYSSRVVDLIVHMAATQ 340
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_ARATH (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Arabidopsis thaliana GN=GAPC PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 1.615e-21 Identity = 48/52 (92.31%), Postives = 51/52 (98.08%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 157 VSTDFVGD+RSSIFDAKAGIALS KFVKLVSWYDNEWGYS+RVVDLIVHM+K Sbjct: 286 VSTDFVGDNRSSIFDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDLIVHMSK 337
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PX_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Hordeum vulgare GN=GAPC PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.109e-21 Identity = 49/54 (90.74%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 163 VSTDFVGDSRSSIFDAKAGIAL+ FVKLVSWYDNEWGYS RVVDLI HMAKTQ Sbjct: 284 VSTDFVGDSRSSIFDAKAGIALNDHFVKLVSWYDNEWGYSNRVVDLIRHMAKTQ 337
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_SINAL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Sinapis alba GN=GAPC PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 2.754e-21 Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 157 VSTDFVGD+RSSIFDAKAGIALS FVKLVSWYDNEWGYSTRVVDLI+HM+K Sbjct: 286 VSTDFVGDNRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSTRVVDLIIHMSK 337
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.698e-21 Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMA 154 VSTDFVGDSRSSIFDAKAGIALSK FVKLVSWYDNEWGYS+RV+DLI HMA Sbjct: 273 VSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLICHMA 323
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSJ (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. japonica GN=GAPC PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.698e-21 Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 163 VSTDFVGDSRSSIFDAKAGIAL+ FVKLV+WYDNEWGYS RV+DLI HMAKTQ Sbjct: 284 VSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKTQ 337
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. indica GN=GAPC PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.698e-21 Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 163 VSTDFVGDSRSSIFDAKAGIAL+ FVKLV+WYDNEWGYS RV+DLI HMAKTQ Sbjct: 284 VSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKTQ 337
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_GINBI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ginkgo biloba PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.698e-21 Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKT 160 VSTDF+GD+RSSIFDAKAGIALS FVKLVSWYDNEWGYS+RV+DLIVHMA T Sbjct: 287 VSTDFIGDNRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSSRVIDLIVHMAST 339
BLAST of CF504079 vs. ExPASy Swiss-Prot
Match: G3PC_RANAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ranunculus acris GN=GAPC PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.047e-20 Identity = 46/54 (85.19%), Postives = 51/54 (94.44%), Query Frame = 2 Query: 2 VSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 163 VSTDF+GD+RSSIFDAKAGIAL+ VKLVSWYDNEWGYS+RVVDLIVHM+KTQ Sbjct: 285 VSTDFIGDNRSSIFDAKAGIALNDNCVKLVSWYDNEWGYSSRVVDLIVHMSKTQ 338 The following BLAST results are available for this feature:
BLAST of CF504079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504079 ID=CF504079; Name=CF504079; organism=Citrus sinensis; type=EST; length=301bpback to top |