CF504080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504080 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 1.336e-36 Identity = 76/107 (71.03%), Postives = 90/107 (84.11%), Query Frame = 2 Query: 53 MWGIIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYG 373 M GI+RQ+ A G S + R R + + R+Y++ K+M VR+ALNSA+DEEMSADPKVF+MGEEVG+YQGAYKI+KGLLEKYGPERV DTPITEAGFTGIGVGAAY G Sbjct: 1 MLGILRQR-AIDGASTLRRTRFALVSARSYAAGAKEMTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAG 106
BLAST of CF504080 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.519e-35 Identity = 80/107 (74.77%), Postives = 85/107 (79.44%), Query Frame = 2 Query: 53 MWGIIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYG 373 M G+IR K IRP S R +SSA KQM VR+ALNSALD EMSAD KVFLMGEEVGEYQGAYK++KGLLEKYGPERVLDTPITEAGFTGIGVGAAYYG Sbjct: 1 MLGVIRNKT----------IRPSFSAFRFFSSA-KQMTVRDALNSALDVEMSADSKVFLMGEEVGEYQGAYKVTKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYG 96
BLAST of CF504080 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.876e-25 Identity = 51/77 (66.23%), Postives = 66/77 (85.71%), Query Frame = 2 Query: 143 SSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYG 373 S+ VK+M VR+ALNSA++EEM D +VFL+GEEV +Y GAYKIS+GLL+K+GP+RV+DTPITE GFTG+ GAA+ G Sbjct: 32 SNGVKEMTVRDALNSAMEEEMKRDDRVFLIGEEVAQYNGAYKISRGLLDKFGPKRVIDTPITEMGFTGLATGAAFAG 108
BLAST of CF504080 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.532e-24 Identity = 51/75 (68.00%), Postives = 64/75 (85.33%), Query Frame = 2 Query: 149 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYG 373 A K++ VR+A+NSALDEE++ D KVF+MGEEV +Y GAYKI+KGL +KYG +R++DTPITEAGF GIGVGAA G Sbjct: 25 ATKEVTVRDAINSALDEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAG 99
BLAST of CF504080 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 6.436e-23 Identity = 52/93 (55.91%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 95 SPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYG 373 +P + +RP + S+ K M VREALNSA+ EE+ D VFL+GEEV +Y GAYK+SKGLL+++G RV+DTPITE GFTG+ VGAA G Sbjct: 17 APTSFVRPSAAAAALRFSSTKTMTVREALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVSKGLLDRFGERRVVDTPITEYGFTGLAVGAALKG 109
BLAST of CF504080 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.446e-22 Identity = 48/72 (66.67%), Postives = 60/72 (83.33%), Query Frame = 2 Query: 158 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYG 373 Q+ VREAL A+ EEM D KVF+MGEEV EYQGAYK+++GLLE++GP+RV+DTPITE GF G+ VGAA+ G Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAG 73
BLAST of CF504080 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.446e-22 Identity = 48/72 (66.67%), Postives = 60/72 (83.33%), Query Frame = 2 Query: 158 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYG 373 Q+ VREAL A+ EEM D KVF+MGEEV EYQGAYK+++GLLE++GP+RV+DTPITE GF G+ VGAA+ G Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAG 73
BLAST of CF504080 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.116e-22 Identity = 47/72 (65.28%), Postives = 60/72 (83.33%), Query Frame = 2 Query: 158 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYG 373 Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++GP+RV+DTPITE GF G+ VGAA+ G Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAG 73
BLAST of CF504080 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 7.116e-22 Identity = 49/75 (65.33%), Postives = 59/75 (78.67%), Query Frame = 2 Query: 149 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYG 373 A M VR+ALN A+DEE+ D +VFLMGEEV +Y GAYKISKGL +K+G +RV+DTPITE GF GI VGAA+ G Sbjct: 21 AASTMTVRDALNQAMDEEIKRDDRVFLMGEEVAQYDGAYKISKGLWKKHGDKRVVDTPITEMGFAGIAVGAAFAG 95
BLAST of CF504080 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.024e-21 Identity = 46/72 (63.89%), Postives = 59/72 (81.94%), Query Frame = 2 Query: 158 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYG 373 Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++G +RV+DTPITE GF G+ VGAA+ G Sbjct: 2 QITVREALRDAMQEEMLRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAG 73 The following BLAST results are available for this feature:
BLAST of CF504080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504080 ID=CF504080; Name=CF504080; organism=Citrus sinensis; type=EST; length=375bpback to top |