CF504085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 7.520e-27 Identity = 55/109 (50.46%), Postives = 74/109 (67.89%), Query Frame = 3 Query: 138 GGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDYWY----PYCPC 452 G + IIS +F+ +L +RND+ C A+GFYTYDAF+ AA A+P F +G+ KRE+AAF AQT HETTGGWP AP G Y+WGYC+ ++ ++G+ Y P PC Sbjct: 73 GSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCF-KEENNGNAPTYCEPKPEWPC 180
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 7.520e-27 Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 3 Query: 147 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDYWYPYCPCPL 458 +G II+R MFE +L +R D+ C FYTYDAFI+AA FP FG +GN+ R+RE+AAFF QT HETTGGW AP G +AWGYC + +++ +Y P L Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDPPYYGRGPIQL 129
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 4.874e-26 Identity = 52/102 (50.98%), Postives = 70/102 (68.63%), Query Frame = 3 Query: 129 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDYW 434 GT G I++RE+FE +L +RN++ C A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG G + GYC++RQ+ Y+ Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSDRYY 118
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 6.366e-26 Identity = 55/112 (49.11%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 129 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDYWYPYCPCPLPG 464 G+ ++G I++ ++F ++L RND+RC A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG A G +A GYC++R+ + +Y P L G Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQMGSGFYGRGPIQLTG 123
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 8.314e-26 Identity = 51/102 (50.00%), Postives = 70/102 (68.63%), Query Frame = 3 Query: 129 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDYW 434 GT G I++RE+FE +L +RN++ C A+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HET GG G + GYC+++Q+ Y+ Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSDRYY 118
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.418e-25 Identity = 56/112 (50.00%), Postives = 75/112 (66.96%), Query Frame = 3 Query: 129 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDYWYPYCPCPLPG 464 GT +G I++ ++F+ +L RND RC A FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG +P G YA GYC++R+ + + +Y P L G Sbjct: 20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNGYYGRGPIQLTG 130
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.418e-25 Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 3 Query: 129 GTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCY 401 G+ G + I+SR +F+ +L +RND C A FYTYDAF+ AA AFP F +G + KRE+AAF AQT HETTGGW AP G YAWGYC+ Sbjct: 75 GSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCF 166
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 5.958e-24 Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 3 Query: 147 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDYWYPYCPCPL 458 +G I++ ++F ++L RND RC A GFYTYDAFI AA +FP FG SG++T R++EIAAFF QT HETTGG A + GYC++RQ + SD +Y P L Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-NDQSDRYYGRGPIQL 127
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.734e-23 Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 3 Query: 147 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDYWYPYCPCPL 458 +G I++ ++F ++L RND RC A GFYTYDAFI AA +FP FG +G++T R++EIAAFF QT HETTGG A + GYC++RQ + SD +Y P L Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-NDQSDRYYGRGPIQL 127
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.957e-23 Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 3 Query: 123 GHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDY 431 G+ + I+S +++ L +++D C ARGFYTY +F+ AA FP F +G RKRE+AAF AQ HETTGGW AP G YAWG CY +++ S Y Sbjct: 41 GYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSY 143 The following BLAST results are available for this feature:
BLAST of CF504085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504085 ID=CF504085; Name=CF504085; organism=Citrus sinensis; type=EST; length=464bpback to top |