CF504085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.119e-21 Identity = 56/130 (43.08%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 102 CAVNRDTGH---------GTDGGELG--KIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDYWYPYC--PC 452 C V+RD G GG G +++ + FE +LP+R+D C ARGFY Y AF+ AA AFPAF +G+ RKRE+AAF AQT H T+ GG Y+WGYCY SD+ P PC Sbjct: 71 CRVSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPC 193
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.119e-21 Identity = 56/130 (43.08%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 102 CAVNRDTGH---------GTDGGELG--KIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDYWYPYC--PC 452 C V+RD G GG G +++ + FE +LP+R+D C ARGFY Y AF+ AA AFPAF +G+ RKRE+AAF AQT H T+ GG Y+WGYCY SD+ P PC Sbjct: 71 CRVSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPC 193
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.768e-21 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 3 Query: 147 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHG-SDYWYPYCPCPLPG 464 +G +I++ +F +LP R++ +C ARGFYTYDAFI AA +FPAFG SG + +RE+AAFF QT HETTGG ++ WGYC+ +++ S +Y P L G Sbjct: 32 VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSPPYYGRGPIQLTG 138
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.060e-20 Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 3 Query: 162 SREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDYWYP 440 + MFE +LP RN++ C +GFYTYDA+ A + +P FG +G++ RKRE+AAFFAQT ET+G + WGYC + +++ SDY P Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDP 160
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.163e-19 Identity = 46/82 (56.10%), Postives = 56/82 (68.29%), Query Frame = 3 Query: 147 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWG 392 + +IS +FE +L +R GFYTYDAFI AAK+FPAF +G+ +RKRE+AAF AQT HETTGGWP AP G Y G Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG 74
BLAST of CF504085 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 8.072e-13 Identity = 39/115 (33.91%), Postives = 63/115 (54.78%), Query Frame = 3 Query: 60 CTRRFSTELWKPALCAVNRDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYI 404 C R S+ + P + +G+ T +++ +F+ + +R D C ++GFY+Y +F+ AA++FPAFG G+ RKRE+AAF A T+G D +AWG C+I Sbjct: 105 CQYRCSSSVRGPRVAL----SGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHI 212 The following BLAST results are available for this feature:
BLAST of CF504085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504085 ID=CF504085; Name=CF504085; organism=Citrus sinensis; type=EST; length=464bpback to top |