CF504092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504092 vs. ExPASy Swiss-Prot
Match: AMYB_SECCE (Beta-amylase (Fragment) OS=Secale cereale GN=BMY1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.758e-22 Identity = 55/92 (59.78%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 193 SHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVKQVASATQTAHVPLAGENALPRYDEYAHEQILRAA 468 SHA E+TAGYYN RD Y PIA+ML RH A NFTC EMRD EQ A+ APE+LV+QV SA + +A ENALPRYD A+ ILR A Sbjct: 1 SHAAEVTAGYYNLHDRDDYRPIARMLTRHHASLNFTCAEMRDSEQSSQAMSAPEELVQQVWSAGWREGLNIACENALPRYDPTAYNTILRNA 92
BLAST of CF504092 vs. ExPASy Swiss-Prot
Match: AMYB_PAEPO (Beta/alpha-amylase OS=Paenibacillus polymyxa PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.765e-14 Identity = 54/138 (39.13%), Postives = 69/138 (50.00%), Query Frame = 1 Query: 25 NGGWCSPYGEFFLSWYSQMLLDHGERILASAKSIFDAT-GVKISVKIAGIHWHYGSRS--HAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDH-EQPQDALCAPEKLVKQVASATQTAHVPLAGENALP 426 NGG+ S YG+ FLSWY +L H I A+A FD+ GV+I KI+G+HW + + H E GYY+ Y + Q FTC+EM D P +L P LV V+S V L GENALP Sbjct: 269 NGGYNSAYGKDFLSWYQSVLEKHLGVIGAAAHKNFDSVFGVRIGAKISGLHWQMNNPAMPHGTEQAGGYYD------YNRLIQKFKDADLDLTFTCLEMSDSGTAPNYSL--PSTLVDTVSSIANAKGVRLNGENALP 398
BLAST of CF504092 vs. ExPASy Swiss-Prot
Match: AMYB_BACFI (Beta-amylase (Fragment) OS=Bacillus firmus PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.372e-13 Identity = 53/137 (38.69%), Postives = 69/137 (50.36%), Query Frame = 1 Query: 25 NGGWCSPYGEFFLSWYSQMLLDHGERILASAKSIFDAT-GVKISVKIAGIHWHYGSRS--HAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDH-EQPQDALCAPEKLVKQVASATQTAHVPLAGENAL 423 NGG+ S YG+ FLSWY +L H I A+A FD+ GV+I KI+G+HW + + H+ E GYY+ Y + Q FTC+EM D P +L P LV V+S V L GENAL Sbjct: 269 NGGYNSAYGKDFLSWYQSVLEKHLGVIGAAAHKNFDSVFGVRIGAKISGLHWQMNNPAMPHSTEQAGGYYD------YNRLIQKFKDADLDLTFTCLEMSDSGTAPNYSL--PSTLVDTVSSIANAKGVRLNGENAL 397
BLAST of CF504092 vs. ExPASy Swiss-Prot
Match: AMYB_THETU (Thermophilic beta-amylase OS=Thermoanaerobacter thermosulfurogenes PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.162e-12 Identity = 49/135 (36.30%), Postives = 62/135 (45.93%), Query Frame = 1 Query: 31 GWCSPYGEFFLSWYSQMLLDHGERILASAKSIFDAT-GVKISVKIAGIHWHYGSRS--HAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRD-HEQPQDALCAPEKLVKQVASATQTAHVPLAGENAL 423 G+ + YG FL+WY +L + I + A S FD V I KIAG+HW Y S + HA E AGYYN Y + FTC+EM D + AP LV VA+ + GENAL Sbjct: 267 GYKTTYGNDFLTWYQSVLTNELANIASVAHSCFDPVFNVPIGAKIAGVHWLYNSPTMPHAAEYCAGYYN------YSTLLDQFKASNLAMTFTCLEMDDSNAYVSPYYSAPMTLVHYVANLANNKGIVHNGENAL 395
BLAST of CF504092 vs. ExPASy Swiss-Prot
Match: AMYB_BACCI (Beta-amylase OS=Bacillus circulans PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.981e-12 Identity = 53/137 (38.69%), Postives = 68/137 (49.64%), Query Frame = 1 Query: 28 GGWCSPYGEFFLSWYSQMLLDHGERILASAKSIFDAT-GVKISVKIAGIHWHYGSRS--HAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDH-EQPQDALCAPEKLVKQVASATQTAHVPLAGENALP 426 GG+ YG+ FLSWY +L +H I A+A FD GV+I KI+GIHW + S H+ E GYY+ Y + Q FT +EM D P +L P LV V+S + V L GENALP Sbjct: 271 GGYNITYGKDFLSWYQSVLENHLGVIGAAAHKNFDPVFGVRIGAKISGIHWQMNNPSMPHSAEHAGGYYD------YNRLIQKFKDTDLDLTFTALEMYDSGTAPNYSL--PSTLVDTVSSIANSKGVRLNGENALP 399
BLAST of CF504092 vs. ExPASy Swiss-Prot
Match: AMYB_BACCE (Beta-amylase OS=Bacillus cereus GN=spoII PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 9.833e-12 Identity = 48/150 (32.00%), Postives = 74/150 (49.33%), Query Frame = 1 Query: 31 GWCSPYGEFFLSWYSQMLLDHGERILASAKSIFDAT-GVKISVKIAGIHWHYGSRS--HAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDH-EQPQDALCAPEKLVKQVASATQTAHVPLAGENALPRYDEYAHEQILRAA 468 G+ S YG+ +L WY +L +H + I A + FD T V I KIAG+HW Y + + H E AGY + Y + FTC+EM D P+ ++ P+ LV+ +A+ + L GENAL +E ++++ A Sbjct: 274 GYLSMYGKDYLEWYQGILENHTKLIGELAHNAFDTTFQVPIGAKIAGVHWQYNNPTIPHGAEKPAGY------NDYSHLLDAFKSAKLDVTFTCLEMTDKGSYPEYSM--PKTLVQNIATLANEKGIVLNGENALSIGNEEEYKRVAEMA 415 The following BLAST results are available for this feature:
BLAST of CF504092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504092 ID=CF504092; Name=CF504092; organism=Citrus sinensis; type=EST; length=481bpback to top |