CF504095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504095 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.911e-23 Identity = 52/102 (50.98%), Postives = 68/102 (66.67%), Query Frame = 3 Query: 15 RKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVS-PASSDXXXXXXXXXLPG--QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFK 311 RKRE+AAF AQT HETTGGW AP G Y+WGYC+ + + SD +YYGRGPIQ+++N NY G+A+G +LL+NPDL+A+D +SFK Sbjct: 130 RKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFK 231
BLAST of CF504095 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 6.486e-23 Identity = 51/100 (51.00%), Postives = 64/100 (64.00%), Query Frame = 3 Query: 18 KREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSD---XXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSF 308 KRE+AAF AQT HETTGGW AP G YAWGYC+ + A+ +YYGRGPIQL++N NY G+A+G DLL +PDL+A+D +SF Sbjct: 134 KREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSF 233
BLAST of CF504095 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.106e-22 Identity = 50/101 (49.50%), Postives = 64/101 (63.37%), Query Frame = 3 Query: 15 RKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFK 311 RKRE+AAF AQ HETTGGW AP G YAWG CY +++P SS D Y+GRGPIQ++WN NY G+ALG D L NP+++A ++F+ Sbjct: 100 RKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQ 200
BLAST of CF504095 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.725e-21 Identity = 53/103 (51.46%), Postives = 67/103 (65.05%), Query Frame = 3 Query: 3 NETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFK 311 ++T RK+EIAAFF QT HETTGG T +P G YA GYC++R+ + + YYGRGPIQLT NY G+A+ DL+NNPDL+ATD +SFK Sbjct: 73 DDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNG-------------YYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFK 161
BLAST of CF504095 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.725e-21 Identity = 51/105 (48.57%), Postives = 67/105 (63.81%), Query Frame = 3 Query: 3 NETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFK 311 ++T RK+EIAAFF QT HET GG G + GYC++RQ+ + +YYGRGPIQLT NY R G+ +GV DL+NNPDL+ATDP++SF+ Sbjct: 74 DDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD--------------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFR 160
BLAST of CF504095 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.071e-21 Identity = 50/105 (47.62%), Postives = 67/105 (63.81%), Query Frame = 3 Query: 3 NETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFK 311 ++T RK+EIAAFF QT HET GG G + GYC+++Q+ + +YYGRGPIQLT NY R G+ +GV +L+NNPDL+ATDP++SFK Sbjct: 74 DDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD--------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFK 160
BLAST of CF504095 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.071e-21 Identity = 49/105 (46.67%), Postives = 65/105 (61.90%), Query Frame = 3 Query: 3 NETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLP--GQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFK 311 ++ RKRE+AAFFAQT ET+G + WGYC + +++P +SD P YYGRGP+QL WN NY CG LG +LL+ P+ +ATDPVLSF+ Sbjct: 110 DDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNP-NSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFE 213
BLAST of CF504095 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.928e-21 Identity = 52/103 (50.49%), Postives = 66/103 (64.08%), Query Frame = 3 Query: 3 NETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFK 311 ++T RK+EIAAFF QT HETTGG A G +A GYC++R+ + S +YGRGPIQLT NY G+A+G DL+NNPDL+ATD +SFK Sbjct: 66 DDTARKKEIAAFFGQTSHETTGGSLSADG-PFAGGYCFVREGNQMGSG-------------FYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFK 154
BLAST of CF504095 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.035e-20 Identity = 49/98 (50.00%), Postives = 63/98 (64.29%), Query Frame = 3 Query: 18 KREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFK 311 +RE+AAFF QT HETTGG T ++ WGYC+ +++ A+S YYGRGPIQLT NY G ALG+DL+ NPDL++TD V+SFK Sbjct: 85 RRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSPP------------YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFK 169
BLAST of CF504095 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.145e-19 Identity = 50/101 (49.50%), Postives = 66/101 (65.35%), Query Frame = 3 Query: 15 RKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXL-PGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFK 311 RKRE+AAF AQT H T+GG Y+WGYCY ++V A+SD PG+ Y+ RGP+Q+ +N NY GEA+G DLL NP+L+ATDP ++FK Sbjct: 148 RKREVAAFLAQTSHATSGG-------PYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFK 240 The following BLAST results are available for this feature:
BLAST of CF504095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504095 ID=CF504095; Name=CF504095; organism=Citrus sinensis; type=EST; length=313bpback to top |