CF504100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504100 vs. ExPASy Swiss-Prot
Match: PARP_SARPE (Poly [ADP-ribose] polymerase OS=Sarcophaga peregrina PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.548e-18 Identity = 41/94 (43.62%), Postives = 64/94 (68.09%), Query Frame = 1 Query: 220 LNMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSQLEEFSK-EDAVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKFFPLDIDY 498 L ++D+ NS+Y LQ+++ D + +VFR WGR+G IGG++L+ FS DA+ +FK L+LEK+GN +E ++NF K G+ +P+DIDY Sbjct: 543 LGITDIQKNKNSFYKLQLLESDMKNRFWVFRSWGRIGT-TIGGNKLDNFSNLVDAIVQFKELYLEKSGN---HFENRENFVKVAGRMYPIDIDY 632 HSP 2 Score: 25.409 bits (54), Expect = 8.548e-18 Identity = 12/33 (36.36%), Postives = 19/33 (57.58%), Query Frame = 3 Query: 117 VTIKVKGQSAVHEASGMQDTGHI-LEDGKSVYN 212 +T+K+K AV SG++D H+ + K YN Sbjct: 508 MTLKIKDGLAVDPDSGLEDVAHVYVSRNKEKYN 540
BLAST of CF504100 vs. ExPASy Swiss-Prot
Match: PARP_DROME (Poly [ADP-ribose] polymerase OS=Drosophila melanogaster GN=Parp PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.878e-17 Identity = 39/94 (41.49%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 220 LNMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSQLEEF-SKEDAVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKFFPLDIDY 498 L ++D+ NSYY +Q+++ DK ++FR WGR+G + IG S+LEEF + E A FK ++ +KTGN +EQ+ NF K+ G+ +P++I Y Sbjct: 540 LGLTDIQRNKNSYYKVQLLKADKKEKYWIFRSWGRIGTN-IGNSKLEEFDTSESAKRNFKEIYADKTGN---EYEQRDNFVKRTGRMYPIEIQY 629 HSP 2 Score: 26.9498 bits (58), Expect = 1.878e-17 Identity = 12/31 (38.71%), Postives = 17/31 (54.84%), Query Frame = 3 Query: 120 TIKVKGQSAVHEASGMQDTGHILEDGKSVYN 212 T KVK AV SG++D H+ D + Y+ Sbjct: 507 TFKVKDGLAVDPDSGLEDIAHVYVDSNNKYS 537
BLAST of CF504100 vs. ExPASy Swiss-Prot
Match: PARP3_SOYBN (Poly [ADP-ribose] polymerase 3 OS=Glycine max GN=PARP3 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.182e-16 Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 223 NMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSQLEEFSKED-AVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKFFPLDIDYGV 504 ++ D G+N Y ++Q+I + F+K GRVG+D +LEE+ D A+ EF RLF E TGN +E WE+++ FQKKP KF+P+D+D G+ Sbjct: 338 SVCDQGRGLNDYCVMQLIVVPENRLHLYFKK-GRVGDDPNAEERLEEWDNVDGALKEFVRLFEEITGNEFEPWEREKKFQKKPLKFYPIDMDDGI 431 HSP 2 Score: 29.6462 bits (65), Expect = 1.182e-16 Identity = 22/89 (24.72%), Postives = 41/89 (46.07%), Query Frame = 3 Query: 12 VPIVREDYLVDCFKRQKKLPFDLYKV---------------EAVGE---SSSMVTIKVKGQSAVHEASGMQDT-GHILEDGKSVYNTDF 221 +P+VRE +L+D ++Q+ P + Y + + GE S +K+ G+ V++ + +Q+ G I E +YN F Sbjct: 249 IPVVREAWLIDSIEKQEPQPLEAYDLVSDLSVDGKGIPWDKQDPGEEAIESLSAELKLYGKRGVYKDTKLQEQGGKIFERDGILYNCAF 337
BLAST of CF504100 vs. ExPASy Swiss-Prot
Match: PARP3_MEDTR (Putative poly [ADP-ribose] polymerase 3 OS=Medicago truncatula GN=PARP3 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 7.409e-16 Identity = 42/95 (44.21%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 223 NMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSQLEEFSKED-AVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKFFPLDIDYGV 504 ++ D +N Y ++Q+I + S F+K GRVG+D +LEE D A+ EF RLF E TGN +E+WE+++ FQKKP KF+P+D+D GV Sbjct: 325 SLCDQGRKLNDYCVMQLIVVPENSLHLYFKK-GRVGDDPSAEERLEECENVDNAIKEFVRLFEEITGNEFESWEREKKFQKKPLKFYPIDMDDGV 418 HSP 2 Score: 26.5646 bits (57), Expect = 7.409e-16 Identity = 21/89 (23.60%), Postives = 39/89 (43.82%), Query Frame = 3 Query: 12 VPIVREDYLVDCFKRQKKLPFDLYKV---------------EAVGE---SSSMVTIKVKGQSAVHEASGM-QDTGHILEDGKSVYNTDF 221 +P+VRE +L D ++Q+ P + Y + + GE S +K+ G+ V++ + + + G I E +YN F Sbjct: 236 IPVVREAWLTDSIEKQEPQPLESYDLVSDLSVDGKGIPWDKQDPGEEAIESLSAELKLYGKRGVYKDTKLHEQDGKIFEKDGILYNCAF 324
BLAST of CF504100 vs. ExPASy Swiss-Prot
Match: PARP3_ARATH (Poly [ADP-ribose] polymerase 3 OS=Arabidopsis thaliana GN=PARP3 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 6.020e-15 Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 223 NMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSQLEEFSKEDA-VCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKFFPLDIDYGV 504 ++ DL G N Y I+Q++ S+ ++ K G+VG+D +LEE+ E+A + EF RLF E GN +E WE+++ QKKP KFFP+D+D G+ Sbjct: 339 SICDLGKGRNEYCIMQLVTVPD-SNLNMYFKRGKVGDDPNAEERLEEWEDEEAAIKEFARLFEEIAGNEFEPWEREKKIQKKPHKFFPIDMDDGI 432 HSP 2 Score: 24.2534 bits (51), Expect = 6.020e-15 Identity = 21/91 (23.08%), Postives = 38/91 (41.76%), Query Frame = 3 Query: 12 VPIVREDYLVDCFKRQKKLPFDLYKV--------------------EAVGESSSMVTIKVKGQSAVHEASGMQDT-GHILEDGKSVYNTDF 221 +P+V E +L+D ++ + P + Y V EA+ S +K+ G+ V+ + +Q+ G I E +YN F Sbjct: 250 LPVVSEAWLIDSVEKHEAQPLEAYDVVSDLSVEGKGIPWDKQDPSEEAI--ESFSAELKMYGKRGVYMDTKLQERGGKIFEKDGLLYNCAF 338
BLAST of CF504100 vs. ExPASy Swiss-Prot
Match: PME1_CAEEL (Poly(ADP-ribose) polymerase pme-1 OS=Caenorhabditis elegans GN=pme-1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.894e-14 Identity = 39/95 (41.05%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 217 TLNMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSQLEEFS-KEDAVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKFFPLDIDY 498 TL+ +DL+ NSYY +Q+++DD+ + YVFR WGRVG + +GG++ E +S +A+ +F+ +F EKT N W +++F+K PG F ++ DY Sbjct: 480 TLSFTDLTQNKNSYYKIQLLKDDQRENYYVFRSWGRVGTE-VGGNKHESYSNSNEAILKFQDVFHEKTKND---WIYRKHFRKMPGMFSYVETDY 570
BLAST of CF504100 vs. ExPASy Swiss-Prot
Match: PARP3_ORYSJ (Poly [ADP-ribose] polymerase 3 OS=Oryza sativa subsp. japonica GN=PARP3 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.149e-11 Identity = 36/97 (37.11%), Postives = 62/97 (63.92%), Query Frame = 1 Query: 223 NMSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNDKIGGSQLEEFSKE--DAVCEFKRLFLEKTGNPWEAWEQKQNFQKKPGKFFPLDIDYGVN 507 ++ DL +N I+Q+I + + +++ K G +G+D++ ++E+F DA+ EF RLF E TGN +E WE+++ F+KK K +PLD+D GV+ Sbjct: 354 SVCDLGGDINQLCIMQLIMVPE-NHLHLYYKKGPIGHDQMAEERVEDFGSRFNDAIKEFVRLFEEVTGNEFEPWEREKKFKKKCMKMYPLDMDDGVD 449 The following BLAST results are available for this feature:
BLAST of CF504100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504100 ID=CF504100; Name=CF504100; organism=Citrus sinensis; type=EST; length=510bpback to top |