CF504103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB5_ORYSJ (Tubulin beta-5 chain OS=Oryza sativa subsp. japonica GN=TUBB5 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.086e-33 Identity = 63/73 (86.30%), Postives = 69/73 (94.52%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIG+KFW+V+C EHGID TGKY GD+DLQLERINVYYNEAS GR+VPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB3_WHEAT (Tubulin beta-3 chain OS=Triticum aestivum GN=TUBB3 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.086e-33 Identity = 63/73 (86.30%), Postives = 69/73 (94.52%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIG+KFW+V+C EHGID TGKY GD+DLQLERINVYYNEAS GR+VPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDQTGKYAGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB3_SOYBN (Tubulin beta chain (Fragment) OS=Glycine max GN=TUBB PE=2 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 7.086e-33 Identity = 63/73 (86.30%), Postives = 69/73 (94.52%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIG+KFW+V+C EHGID TGKY GD++LQLERINVYYNEAS GRYVPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB7_MAIZE (Tubulin beta-7 chain OS=Zea mays GN=TUBB7 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 9.255e-33 Identity = 63/73 (86.30%), Postives = 69/73 (94.52%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIG+KFW+V+C EHGID TGKY GD+DLQLERINVYYNEAS GR+VPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB1_ELEIN (Tubulin beta-1 chain OS=Eleusine indica GN=TUBB1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 9.255e-33 Identity = 63/73 (86.30%), Postives = 69/73 (94.52%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIG+KFW+V+C EHGID TGKY GD+DLQLERINVYYNEAS GR+VPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB1_ARATH (Tubulin beta-1 chain OS=Arabidopsis thaliana GN=TUBB1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 9.255e-33 Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDT-DLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILH+QGGQCGNQIGSKFW+V+C EHG+DPTG+Y GD+ DLQLERINVYYNEAS GRYVPRAVLMDLEPGTM Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRYVPRAVLMDLEPGTM 74
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB5_ARATH (Tubulin beta-5 chain OS=Arabidopsis thaliana GN=TUBB5 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.579e-32 Identity = 65/74 (87.84%), Postives = 69/74 (93.24%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDT-DLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIGSKFW+V+C EHGID TG+Y GDT DLQLERINVYYNEAS GRYVPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRYVPRAVLMDLEPGTM 74
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB4_WHEAT (Tubulin beta-4 chain OS=Triticum aestivum GN=TUBB4 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.062e-32 Identity = 62/73 (84.93%), Postives = 69/73 (94.52%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIG+KFW+V+C EHGID TG+Y GD+DLQLERINVYYNEAS GR+VPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDGTGRYAGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB3_ELEIN (Tubulin beta-3 chain OS=Eleusine indica GN=TUBB3 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.693e-32 Identity = 62/73 (84.93%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIG+KFW+V+C EHGID TGKY GD+DLQLERINVYYNEA GR+VPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEAGGGRFVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB6_GOSHI (Tubulin beta-6 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.517e-32 Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGD--TDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILH+QGGQCGNQIGSKFW+V+C EHG+DPTGKY GD +D+QLERI+VYYNEAS GRYVPRAVLMDLEPGTM Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGKYNGDGSSDIQLERIDVYYNEASGGRYVPRAVLMDLEPGTM 75 The following BLAST results are available for this feature:
BLAST of CF504103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504103 ID=CF504103; Name=CF504103; organism=Citrus sinensis; type=EST; length=288bpback to top |