CF504103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB_STYLE (Tubulin beta chain OS=Stylonychia lemnae GN=TUBB1 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 7.835e-32 Identity = 61/73 (83.56%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+HIQGGQCGNQIG+KFW+V+ EHGIDPTG Y GD+DLQLERINVYYNEA+ GRYVPRAVLMDLEPGTM Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB2_SOLTU (Tubulin beta-2 chain OS=Solanum tuberosum GN=TUBB2 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 7.835e-32 Identity = 62/76 (81.58%), Postives = 71/76 (93.42%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQG---DTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIGSKFW+V+C EHG+DPTG+Y+G ++DLQLERINVY+NEAS GRYVPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGTAAESDLQLERINVYFNEASGGRYVPRAVLMDLEPGTM 76
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB1_SOLTU (Tubulin beta-1 chain OS=Solanum tuberosum GN=TUBB1 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 7.835e-32 Identity = 62/76 (81.58%), Postives = 71/76 (93.42%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQG---DTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIGSKFW+V+C EHG+DPTG+Y+G ++DLQLERINVY+NEAS GRYVPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGTAAESDLQLERINVYFNEASGGRYVPRAVLMDLEPGTM 76
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB_TETTH (Tubulin beta chain OS=Tetrahymena thermophila GN=BTU1 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.023e-31 Identity = 60/73 (82.19%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+HIQGGQCGNQIG+KFW+V+ EHGIDPTG Y GD+DLQLERINVYYNEA+ GRYVPRA+LMDLEPGTM Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB_TETPY (Tubulin beta chain OS=Tetrahymena pyriformis GN=BETA-TT1 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.023e-31 Identity = 60/73 (82.19%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+HIQGGQCGNQIG+KFW+V+ EHGIDPTG Y GD+DLQLERINVYYNEA+ GRYVPRA+LMDLEPGTM Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB2_DAUCA (Tubulin beta-2 chain OS=Daucus carota GN=TUBB2 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.023e-31 Identity = 62/73 (84.93%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIGSKFW+VVC EHGIDPTG+ ++DLQL+RINVYYNEAS GRYVPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGQVLSESDLQLDRINVYYNEASGGRYVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB1_PARTE (Tubulin beta chain OS=Paramecium tetraurelia GN=bPT2 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.023e-31 Identity = 60/73 (82.19%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+HIQGGQCGNQIG+KFW+V+ EHGIDPTG Y GD+DLQLERINVYYNEA+ GRYVPRA+LMDLEPGTM Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB_EUPCR (Tubulin beta chain OS=Euplotes crassus PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.336e-31 Identity = 59/73 (80.82%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+H+QGGQCGNQIG+KFW+V+ EHG+DPTG Y GD+DLQLERINVYYNEA+ GRYVPRAVLMDLEPGTM Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB1_CYAPA (Tubulin beta-1 chain OS=Cyanophora paradoxa GN=TUBB1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.336e-31 Identity = 59/73 (80.82%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+H+QGGQCGNQIG+KFW+V+ EHG+DPTG Y GD+DLQLERINVYYNEA+ GRYVPRAVLMDLEPGTM Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB_PHYCI (Tubulin beta chain OS=Phytophthora cinnamomi PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.745e-31 Identity = 58/73 (79.45%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +RE++HIQGGQCGNQIG+KFW+V+ EHG+DPTG Y GD+DLQLERINVYYNEA+ GRYVPRA+LMDLEPGTM Sbjct: 1 MRELVHIQGGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTM 73 The following BLAST results are available for this feature:
BLAST of CF504103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504103 ID=CF504103; Name=CF504103; organism=Citrus sinensis; type=EST; length=288bpback to top |