CF504103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB9_ARATH (Tubulin beta-9 chain OS=Arabidopsis thaliana GN=TUBB9 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.745e-31 Identity = 61/73 (83.56%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIG+KFW+V+C EHGID TG+ GDTDLQLERINVY+NEAS G+YVPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB_CHLRE (Tubulin beta-1/beta-2 chain OS=Chlamydomonas reinhardtii GN=TUBB1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.280e-31 Identity = 60/73 (82.19%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+HIQGGQCGNQIG+KFW+VV EHGIDPTG Y GD+DLQLERINVY+NEA+ GRYVPRA+LMDLEPGTM Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB1_VOLCA (Tubulin beta chain OS=Volvox carteri GN=TUBB1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.280e-31 Identity = 60/73 (82.19%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+HIQGGQCGNQIG+KFW+VV EHGIDPTG Y GD+DLQLERINVY+NEA+ GRYVPRA+LMDLEPGTM Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB_CHLIN (Tubulin beta chain OS=Chlamydomonas incerta GN=TUBB PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.977e-31 Identity = 59/73 (80.82%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+HIQGGQCGNQIG+KFW+VV EHG+DPTG Y GD+DLQLERINVY+NEA+ GRYVPRA+LMDLEPGTM Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB_EUPOC (Tubulin beta chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.888e-31 Identity = 58/73 (79.45%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+H+QGGQCGNQIG+KFW+V+ EHG++PTG Y GD+DLQLERINVYYNEA+ GRYVPRAVLMDLEPGTM Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGVEPTGAYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB4_OOMCK (Tubulin beta-4 chain OS=Oomycete-like sp. (strain MacKay2000) GN=TUBB4 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.888e-31 Identity = 59/73 (80.82%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+HIQGGQCG+QIG+KFW+V+ EHGIDPTG Y GD+DLQLER+NVYYNEA+ GRYVPRAVLMDLEPGTM Sbjct: 1 MREIVHIQGGQCGDQIGAKFWEVISDEHGIDPTGTYNGDSDLQLERVNVYYNEATGGRYVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB_CICAR (Tubulin beta chain OS=Cicer arietinum GN=TUBB PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 5.078e-31 Identity = 62/75 (82.67%), Postives = 68/75 (90.67%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKY--QGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILH+QGGQCGNQIGSKFW+V+C EHGID TGKY +G +D QLERINVYYNEAS GRYVPRAVLMDLEPGTM Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGIDQTGKYISEGGSDTQLERINVYYNEASGGRYVPRAVLMDLEPGTM 75
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB_THAWE (Tubulin beta chain OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.633e-31 Identity = 58/73 (79.45%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+HIQGGQCGNQIG+KFW+V+ EHG+DPTG Y GD+DLQLERINVY+NEA+ GRYVPRA+LMDLEPGTM Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVMSDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB_NAEGR (Tubulin beta chain OS=Naegleria gruberi PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.633e-31 Identity = 58/73 (79.45%), Postives = 67/73 (91.78%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+HIQ GQCGNQIG+KFW+V+ EHG+DPTG Y GD+DLQLERINVYYNEA+ GRYVPRA+LMDLEPGTM Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGVDPTGAYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB6_ECTVR (Tubulin beta-6 chain OS=Ectocarpus variabilis GN=TUBB6 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.633e-31 Identity = 57/73 (78.08%), Postives = 67/73 (91.78%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+H+Q GQCGNQIGSKFW+V+ EHGIDPTG+Y GD+DLQLERIN Y+NEA+ GRYVPRA+LMDLEPGTM Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGRYHGDSDLQLERINCYFNEATAGRYVPRAILMDLEPGTM 73 The following BLAST results are available for this feature:
BLAST of CF504103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504103 ID=CF504103; Name=CF504103; organism=Citrus sinensis; type=EST; length=288bpback to top |