CF504103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB_TRITR (Tubulin beta chain OS=Trichuris trichiura PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.478e-30 Identity = 58/73 (79.45%), Postives = 67/73 (91.78%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+HIQ GQCGNQIG+KFW+V+ EHGIDPTG Y GD+DLQLERINVYYNEAS G+YVPRA+L+DLEPGTM Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB2_ECHMU (Tubulin beta-2 chain OS=Echinococcus multilocularis GN=TUB-2 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.478e-30 Identity = 58/73 (79.45%), Postives = 67/73 (91.78%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+HIQ GQCGNQIG+KFW+V+ EHGIDPTG Y GD+DLQLERINVYYNEAS G+YVPRA+L+DLEPGTM Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB1_NOTCO (Tubulin beta-1 chain OS=Notothenia coriiceps neglecta GN=tubb1 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.478e-30 Identity = 58/73 (79.45%), Postives = 67/73 (91.78%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+H+Q GQCGNQIGSKFW+V+ EHGIDPTG Y GD+DLQL+RINVYYNEAS G+YVPRAVL+DLEPGTM Sbjct: 1 MREIVHLQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLDRINVYYNEASGGKYVPRAVLVDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB4_ARATH (Tubulin beta-4 chain OS=Arabidopsis thaliana GN=TUBB4 PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 1.930e-30 Identity = 59/73 (80.82%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIG+KFW+V+C EHGID TG+Y GD+ LQLERI+VY+NEAS G+YVPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB3_OOMCK (Tubulin beta-3 chain OS=Oomycete-like sp. (strain MacKay2000) GN=TUBB3 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.930e-30 Identity = 58/73 (79.45%), Postives = 67/73 (91.78%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+HIQ GQCGNQIG+KFW V+ EHG+DPTG Y+GD+DLQLERINVYYNEA+ GRYVPRAVL+DLEPGTM Sbjct: 1 MREIVHIQAGQCGNQIGAKFWQVISDEHGVDPTGTYKGDSDLQLERINVYYNEATGGRYVPRAVLIDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB1_MANSE (Tubulin beta-1 chain OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.930e-30 Identity = 57/73 (78.08%), Postives = 67/73 (91.78%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+HIQ GQCGNQIG+KFW+++ EHGIDPTG Y GD+DLQLERINVYYNEAS G+YVPRA+L+DLEPGTM Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB_TOXGO (Tubulin beta chain OS=Toxoplasma gondii PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.520e-30 Identity = 57/73 (78.08%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+H+QGGQCGNQIG+KFW+V+ EHGIDPTG Y GD+DLQLERINV+YNEA+ GR+VPRA+LMDLEPGTM Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGIDPTGTYCGDSDLQLERINVFYNEATGGRFVPRAILMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB8_ORYSJ (Tubulin beta-8 chain OS=Oryza sativa subsp. japonica GN=TUBB8 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.520e-30 Identity = 58/73 (79.45%), Postives = 66/73 (90.41%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REILHIQGGQCGNQIG+KFW+V+C EHG+DPTG Y G + QLERINVY+NEAS GR+VPRAVLMDLEPGTM Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHVPRAVLMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB5_ECTVR (Tubulin beta-5 chain OS=Ectocarpus variabilis GN=TUBB5 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.520e-30 Identity = 57/73 (78.08%), Postives = 66/73 (90.41%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+H+Q GQCGNQIGSKFW+V+ EHGIDPTG Y GD+DLQLERIN Y+NEA+ GRYVPRA+LMDLEPGTM Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTM 73
BLAST of CF504103 vs. ExPASy Swiss-Prot
Match: TBB4_XENLA (Tubulin beta-4 chain OS=Xenopus laevis GN=tubb4 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.299e-30 Identity = 57/73 (78.08%), Postives = 67/73 (91.78%), Query Frame = 1 Query: 70 VREILHIQGGQCGNQIGSKFWDVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTM 288 +REI+H+Q GQCGNQIG+KFW+V+ EHGIDPTG Y GD+DLQLERINVYYNEA+ G+YVPRAVL+DLEPGTM Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGAYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTM 73 The following BLAST results are available for this feature:
BLAST of CF504103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504103 ID=CF504103; Name=CF504103; organism=Citrus sinensis; type=EST; length=288bpback to top |