CF504106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: GALE_YEREN (UDP-glucose 4-epimerase OS=Yersinia enterocolitica GN=galE PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 5.754e-30 Identity = 64/131 (48.85%), Postives = 82/131 (62.60%), Query Frame = 3 Query: 3 VAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 395 VA+G+ +L V+G DY T DG+G+RDYIHV+DLA+GH++ L L G +YNLGTG G SVL M+ FE+ +GK IP RRPGD +AS A EL W AK + +M +D W W NP GY Sbjct: 207 VAIGKLSKLLVYGNDYDTPDGSGIRDYIHVMDLAEGHLSTLINLTS---GFRIYNLGTGVGYSVLHMIKEFERITGKNIPFDIVSRRPGDIAECWASPELAHLELGWYAKRTLVDMLQDAWKWQKMNPNGY 334
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: ARAE3_ORYSJ (Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp. japonica GN=UEL-3 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 3.859e-26 Identity = 63/134 (47.01%), Postives = 80/134 (59.70%), Query Frame = 3 Query: 6 AVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWASKNPYGYESS 404 A+G P L V GTDY T DGT +RDYI V DL D H+ AL+K + K+G +YN+GTG+G SV E V A +KA+G I + RRPGD VY+ K ELNW A+Y + E W W +P GY S+ Sbjct: 275 ALGIIPGLKVKGTDYPTTDGTCIRDYIDVTDLVDAHVKALNKAEPSKVG--IYNVGTGRGRSVKEFVDACKKATGVNIKIEYLSRRPGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYGSN 406
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: ARAE3_ARATH (Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g20460 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 5.041e-26 Identity = 65/134 (48.51%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 6 AVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWASKNPYGYESS 404 A G P L V GTDY T DGT VRDYI V DL D H+ AL K +G +YN+GTGKG SV E V A +KA+G I + RRPGD VY+ K R+LNW A+Y + E W W +P+GY SS Sbjct: 280 ARGVIPGLQVKGTDYKTGDGTCVRDYIDVTDLVDAHVKALEKAKPRNVG--IYNVGTGKGRSVKEFVEACKKATGVDIKVDFLPRRPGDYAEVYSDPAKILRDLNWSARYTNLQESLEVAWKWQKTHPHGYASS 411
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: GALE_LACCA (UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.267e-25 Identity = 60/136 (44.12%), Postives = 78/136 (57.35%), Query Frame = 3 Query: 3 VAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWASKNPYGYESSN 407 VA G R L ++G DY TKDGT VRDY+HV+DLAD HI AL LD +N+G+ G S LE++ A K +G++IP RR GD + AS+ KA L WK Y ID++ WNW +P G+ N Sbjct: 197 VAAGTRTGLQIYGDDYPTKDGTNVRDYVHVVDLADAHILALKYLDAGN-KSSAFNIGSAHGFSNLEILNAARKVTGQEIPATMGPRRAGDPSTLIASSEKARDILGWKPNYDDIDKIIETAWNWHENHPEGFGDRN 331
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: ARAE1_ORYSJ (Probable UDP-arabinose 4-epimerase 1 OS=Oryza sativa subsp. japonica GN=UEL-1 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 3.267e-25 Identity = 64/131 (48.85%), Postives = 79/131 (60.31%), Query Frame = 3 Query: 6 AVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWASKNPYGY 395 A+G P L V GTDY T DGT VRDYI V DL D H+ AL+K + K+G +YN+GTGKG SV E V A +KA+G I + RRPGD VY+ K ELNW A++ + E R W W K+ GY Sbjct: 285 ALGIIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAERGKVG--IYNVGTGKGRSVKEFVEACKKATGVDIKVDYFPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQKKHRSGY 413
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: ARAE4_ARATH (Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana GN=At5g44480 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.267e-25 Identity = 61/133 (45.86%), Postives = 80/133 (60.15%), Query Frame = 3 Query: 6 AVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWASKNPYGYES 401 A G P L V GTDY T DGT +RDYI V DL D H+ AL K K+G +YN+GTGKG SV E V A +KA+G +I + RRPGD VY+ K ++LNW A++ + + + W W +P+GY S Sbjct: 305 ARGFIPGLQVKGTDYKTSDGTCIRDYIDVTDLVDAHVKALEKAQPRKVG--IYNVGTGKGRSVKEFVEACKKATGVEIKVDFLPRRPGDYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRWQKIHPHGYNS 435
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: EXOB_RHILT (UDP-glucose 4-epimerase OS=Rhizobium leguminosarum bv. trifolii GN=exoB PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.573e-25 Identity = 59/127 (46.46%), Postives = 80/127 (62.99%), Query Frame = 3 Query: 6 AVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEV-YNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKN 383 A+GRR VFG+DY T+DGT VRDYIHV+DLAD H+ A+ L K G V NLGTG GT+V E++ A E+ S + P+ GRR GD+ + A+ KA L W +Y + E+ R W+W +K+ Sbjct: 200 ALGRRQGFKVFGSDYETRDGTCVRDYIHVLDLADAHVRAVEYL--LKGGDSVALNLGTGTGTTVKELLGAIEEVSNRPFPVEYIGRREGDSHTLVANNDKARDVLGWVPQYDLSEIIRSAWDWHAKS 324
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: GALE_STRTR (UDP-glucose 4-epimerase OS=Streptococcus thermophilus GN=galE PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 9.506e-25 Identity = 59/135 (43.70%), Postives = 85/135 (62.96%), Query Frame = 3 Query: 3 VAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCE--VYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWASKNPYGYE 398 VA G R ++ +FG DY+T DGT VRDY+H DLAD H+ A+ L + G E +NLG+ G S L+++ A K +GK+IP K+ RRPGD +I+ AS+ KA L WK ++ I+++ W W S +P GY+ Sbjct: 198 VAQGVREKIMIFGDDYNTPDGTNVRDYVHPFDLADAHLLAVEYL---RKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEKADRRPGDPDILIASSEKARTVLGWKPQFDNIEKIIASAWAWHSSHPKGYD 329
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: ARAE2_ORYSJ (Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa subsp. japonica GN=UEL-2 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.242e-24 Identity = 62/134 (46.27%), Postives = 76/134 (56.72%), Query Frame = 3 Query: 6 AVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWASKNPYGYESS 404 A+G P L V GTDY T DGT +RDYI V DL D H+ AL K K+G +YN+GTG G SV E V A + A+G I + RRPGD VY+ K ELNW A+Y + E W W +P GY S+ Sbjct: 260 ALGIIPGLKVRGTDYPTADGTCIRDYIDVTDLVDAHVKALDKAQPGKVG--IYNVGTGHGRSVKEFVEACKSATGASIKVSFLTRRPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWKWQKAHPNGYGSA 391
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: ARAE1_ARATH (UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.621e-24 Identity = 63/137 (45.99%), Postives = 80/137 (58.39%), Query Frame = 3 Query: 6 AVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWAS--KNPYGYESSN 407 A G P L + GTDY T DGT VRDYI V DL D H+ AL K K+G +YN+GTGKG+SV E V A +KA+G +I + RR GD VY+ K +ELNW AK+ + E W W +N YG +S+ Sbjct: 281 ARGIMPGLQIKGTDYKTADGTCVRDYIDVTDLVDAHVKALQKAKPRKVG--IYNVGTGKGSSVKEFVEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLHRNGYGLTTSS 415 The following BLAST results are available for this feature:
BLAST of CF504106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504106 ID=CF504106; Name=CF504106; organism=Citrus sinensis; type=EST; length=521bpback to top |