CF504106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: GALE_BACHD (UDP-glucose 4-epimerase OS=Bacillus halodurans GN=galE PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.118e-24 Identity = 57/137 (41.61%), Postives = 84/137 (61.31%), Query Frame = 3 Query: 3 VAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGH-IAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWASKNPYGYESSN 407 VA+G+R + +FG DY T+DG+ +RDYIHV+DLA+ H +A H D + G +NLG GKG SV E++ + +G IP + RR GD + AS+ KA+ L W+ KY ++ M WNW ++P+GY + N Sbjct: 196 VALGQRERVAIFGDDYQTEDGSCIRDYIHVMDLANAHYLACEHLRKDGQSGS--FNLGNGKGFSVKEVIEVCRQVTGHPIPAEIAPRRSGDPASLIASSEKAQTILGWEPKYPSLETMVEHAWNWHKEHPHGYSTEN 330
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: ARAE2_ARATH (Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana GN=At2g34850 PE=2 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 6.162e-24 Identity = 63/138 (45.65%), Postives = 80/138 (57.97%), Query Frame = 3 Query: 6 AVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWASKNPYGYESSNSTS 416 A G P L + GTDY T DGT VRDYI V DL D H+ AL K K+G ++N+GTGKG+SV E V A +KA+G I + RR GD VY+ K + ELNW AK+ + E + W W + GY SS+ S Sbjct: 280 ARGIIPGLQIKGTDYKTVDGTCVRDYIDVTDLVDAHVKALEKAKPRKVG--IFNVGTGKGSSVKEFVEACKKATGVDIKVDYLERRAGDYAEVYSDPRKIKEELNWTAKHTNLQESLKMAWRWQKLHRSGYGSSSLVS 415
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: GALE_STRMU (UDP-glucose 4-epimerase OS=Streptococcus mutans GN=galE PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.793e-23 Identity = 56/133 (42.11%), Postives = 80/133 (60.15%), Query Frame = 3 Query: 3 VAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWASKNPYGYE 398 VA G R ++ +FG DY+T DGT VRDY+H DLAD H+ AL+ L +NLG+ G S L+++ A K +G+KIP K+ RR GD + + AS+ KA L WK ++ I+++ W W S P GY+ Sbjct: 199 VAQGVREKIMIFGDDYNTPDGTNVRDYVHPFDLADAHLLALNYLRQGN-PSTAFNLGSSTGFSNLQILEAARKVTGQKIPAEKAARRSGDPDTLIASSEKAREVLGWKPQFDDIEKIIASAWAWHSSYPKGYD 330
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: EXOB_RHIME (UDP-glucose 4-epimerase OS=Rhizobium meliloti GN=exoB PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.994e-23 Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = 3 Query: 6 AVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCE--VYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYG 392 A+GRR VFGTDY T+DGT VRDYIHV+DLAD H+ A+ L + G E NLGTG GT+V E++ A EK + + + + RR GD+ + A+ KA + L W+ +Y + + WNW S+ G Sbjct: 200 ALGRREGFKVFGTDYDTRDGTCVRDYIHVLDLADAHVRAVDYLLE---GGESVALNLGTGTGTTVKELLDAIEKVAKRPFNIGYAERREGDSTTLVANNDKARQVLGWEPQYDLAAITESAWNWHSRRNQG 327
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: GALE_LACHE (UDP-glucose 4-epimerase OS=Lactobacillus helveticus GN=galE PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.416e-22 Identity = 56/133 (42.11%), Postives = 76/133 (57.14%), Query Frame = 3 Query: 6 AVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAAL-HKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWASKNPYGYE 398 A+ + T+FG DY TKDGT VRDY+ V DL D HI AL H + K +V+NLGT G S LE++ + +K +G IP RR GD + + A + KA L WK K+ +D++ W W +P GYE Sbjct: 198 AISGDGKFTIFGDDYDTKDGTNVRDYVQVEDLIDAHILALKHMMKTNK--SDVFNLGTAHGYSNLEILESAKKVTGIDIPYTMGPRRGGDPDSLVADSTKARTVLGWKPKHENVDDVIATAWKWHKSHPKGYE 328
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: EXOB_AZOBR (UDP-glucose 4-epimerase OS=Azospirillum brasilense GN=exoB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.862e-21 Identity = 53/122 (43.44%), Postives = 72/122 (59.02%), Query Frame = 3 Query: 9 VGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYG-IDEMCRDQWNW 371 +GRRP L +FGTDY T DGT +RDYIHV DLAD H+ AL L G + N G G+G SV E+V E+ SG+++P + RRPGD + A + +L W K+ +D + R +W Sbjct: 207 LGRRPPLAIFGTDYDTPDGTCIRDYIHVSDLADAHVLALLHLRRGG-GSLLMNCGYGRGASVREVVRTLEEVSGEQVPATFADRRPGDPPQLVAGADRIREQLGWVPKHDRLDGIVRSALSW 327
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: GALE_STRLI (UDP-glucose 4-epimerase OS=Streptomyces lividans GN=galE PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 1.571e-19 Identity = 53/132 (40.15%), Postives = 72/132 (54.55%), Query Frame = 3 Query: 3 VAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE 398 VA GRR ++V+G DY T D T VRDYIHV DLA+ H+ A+ + P + NLG G G SV E+V + +G IP + + RR D ++ AS G A +L W + D W W S +P GY+ Sbjct: 198 VAQGRREAISVYGDDYPTPD-TCVRDYIHVADLAEAHLLAVRRR--PGNEHLICNLGNGNGFSVREVVETVRRVTGHPIPEIMAPRRGRDPAVLVASAGTAREKLGWNPSRADLAIVSDAWEWHSSHPKGYD 326
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: GALE_CORDI (UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae GN=galE PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.051e-19 Identity = 49/127 (38.58%), Postives = 78/127 (61.42%), Query Frame = 3 Query: 3 VAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWK-AKYGIDEMCRDQWNWASK 380 VA+G R ++ +FG D+ T+DGT +RDYIH+ DLAD HI AL + + ++NLG+G+G SV +++ + +G IP + RR GD ++ AS+ KA+ EL WK + + + D W + S+ Sbjct: 193 VALGHRDKIFMFGDDWPTEDGTPIRDYIHIRDLADAHILALQ--SNVEGSHRIFNLGSGEGYSVKQVIDTCREVTGHLIPAEVAPRRAGDPAVLIASSAKAQSELGWKPQRTDLHTIVSDAWAFTSQ 317
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: GALE_CORGL (UDP-glucose 4-epimerase OS=Corynebacterium glutamicum GN=galE PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 3.868e-18 Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 Query: 3 VAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWAS 377 VA G R + +FG D+ T DGT VRDYIH++DLA H+ AL + K ++NLG+G G SV ++V + +G IP + RR GD + AS+ KA++EL W ++ + + D W + S Sbjct: 193 VATGHREKTFMFGDDWPTPDGTAVRDYIHILDLAKAHVLALESNEAGK--HRIFNLGSGDGYSVKQVVEMCREVTGHPIPAEVAPRRAGDPATLIASSEKAKQELGWTPEHTDLRTIVEDAWAFTS 316
BLAST of CF504106 vs. ExPASy Swiss-Prot
Match: GALE_MYCPN (UDP-glucose 4-epimerase OS=Mycoplasma pneumoniae GN=galE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.780e-14 Identity = 41/112 (36.61%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 33 VFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLD-DPKIGCEVYNLGTGKGTSVLEMVAAFEKA-SGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQ 362 ++G DY TKDG+ +RDYIHV+DL D H+ A L +PK+ E +NLG+G+G S E++ + + +++ L RR GD ++ KA+R LN++ + +M D+ Sbjct: 216 LYGDDYDTKDGSCIRDYIHVVDLCDAHLLAWKWLQANPKVRFESFNLGSGQGFSNWEVINTAQAIFAPEQLQLKIESRRAGDPPVLVVDCTKAKRLLNFQPTRSLHKMLSDE 327 The following BLAST results are available for this feature:
BLAST of CF504106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504106 ID=CF504106; Name=CF504106; organism=Citrus sinensis; type=EST; length=521bpback to top |