CF504108

Overview
NameCF504108
Unique NameCF504108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_LISIN (Phosphoserine aminotransferase OS=Listeria innocua GN=serC PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.551e-29
Identity = 62/126 (49.21%), Postives = 82/126 (65.08%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF 384
            EN S+YNTPP + +Y+  LVFE++ E GG+  +E +NRKKA LLY+ I+ S+ F+  PVE S RS  N+PF    ++                LKGHRSVGGMRAS+YNA P+ GVE L+AFM+ F
Sbjct:  228 ENGSMYNTPPTFAVYVAKLVFEWIKEQGGVAGIEALNRKKAALLYDYIEQSD-FFSSPVEPSARSLTNIPFVTNSAEFDKAFVKEAEANGFKNLKGHRSVGGMRASLYNAFPIEGVEALIAFMEKF 352          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ECO27 (Phosphoserine aminotransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.551e-29
Identity = 67/131 (51.15%), Postives = 89/131 (67.94%), Query Frame = 1
Query:    4 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  232 NDNDSMFNTPPTFAWYLSGLVFKWLKANGGVVAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_BACAA (Phosphoserine aminotransferase OS=Bacillus anthracis (strain A0248) GN=serC PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.551e-29
Identity = 63/132 (47.73%), Postives = 88/132 (66.67%), Query Frame = 1
Query:    1 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            + +NNSLYNT P + IY+  LV E+L E GG++ +E+ N+ K+ LLYN +D S      PV+ + RS MN+PFT    +L            +V LKGHRSVGGMRASIYNAMP+ GV++LV +MK+F+ ++
Sbjct:  230 YSKNNSLYNTLPSFSIYVTKLVLEWLKEQGGVSAIEEQNKMKSSLLYNFLDESK-LLTSPVDPAYRSLMNIPFTTPSEELNNEFLQKAKERGLVTLKGHRSVGGMRASIYNAMPVQGVQQLVNYMKEFELEN 360          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_AZOSE (Phosphoserine aminotransferase OS=Azoarcus sp. (strain EbN1) GN=serC PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.551e-29
Identity = 67/130 (51.54%), Postives = 84/130 (64.62%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            EN S+ NTPP Y IY+ GLVF +L   GGL  VE  N  K++LLY+ +D S+ FY   V +  RS MN+PF L    L            + QLKGH+SVGGMRASIYNAMPLAGV+ LV +M+DF A++
Sbjct:  237 ENGSMLNTPPTYAIYIAGLVFRWLKAQGGLAAVEANNIAKSDLLYDFLDASD-FYENRVAQDSRSRMNIPFLLRDDALNDPFLAGAKAAGLTQLKGHKSVGGMRASIYNAMPLAGVQALVDYMRDFSARN 365          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_MARMS (Phosphoserine aminotransferase OS=Marinomonas sp. (strain MWYL1) GN=serC PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.637e-29
Identity = 64/130 (49.23%), Postives = 84/130 (64.62%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            EN+S+ NTPP + IY+  LVFE+L   GG+  +E++N +KA+ LY+ ID SN FY  PV+   RS MNVPF L    L            +  L GHRSVGGMRASIYNAMP+ G+E L+ FM+ F+ +H
Sbjct:  230 ENDSMINTPPTFAIYLADLVFEWLEAQGGVEAIEQINIRKAQALYDFIDSSN-FYSNPVDPVYRSRMNVPFILADESLEALFLQESEAAGLRTLAGHRSVGGMRASIYNAMPMEGIEALIEFMRGFEERH 358          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_HUMAN (Phosphoserine aminotransferase OS=Homo sapiens GN=PSAT1 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 4.637e-29
Identity = 65/133 (48.87%), Postives = 85/133 (63.91%), Query Frame = 1
Query:   10 NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTL--EKSD--LXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            N+SLYNTPPC+ IY+ GLV E++   GG   +EK++  K++ +Y +ID S GFY CPVE   RS MN+PF +   K D  L            M+ LKGHRSVGG+RAS+YNA+ +  V+KL AFMK F   H
Sbjct:  236 NSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_XYLFT (Phosphoserine aminotransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=serC PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.056e-29
Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = 1
Query:    1 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            H E +S+ NTPP +  Y+ GL  +++L  GG+ E  + N+ KA+L+Y  ID S GFYR  V  +VRS MN+PF L   +             ++ LKGH++VGG+RAS+YNAMPLAGV+ LVAFM DFQ ++
Sbjct:  230 HAERDSMLNTPPTFNWYLLGLTVKWMLAEGGVQEFARRNQAKAQLVYQTIDQSGGFYRNGVAAAVRSRMNIPFFLPNVEQDARFAAEAKAAGLLSLKGHKAVGGIRASLYNAMPLAGVQALVAFMHDFQQRY 361          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_PSEA7 (Phosphoserine aminotransferase OS=Pseudomonas aeruginosa (strain PA7) GN=serC PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.056e-29
Identity = 65/127 (51.18%), Postives = 83/127 (65.35%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 387
            +N S+YNTP  Y  Y+ GLVFE+L E GG+  +E+ NR K +LLY  ID S+ FY  P++ S RS+MNVPF L    L            ++ LKGHRSVGGMRASIYNA+ L  VE LVA+M +F+
Sbjct:  232 DNGSMYNTPATYSWYLSGLVFEWLKEQGGVTAMERRNRAKKDLLYKTIDASD-FYTNPIQPSARSWMNVPFRLADERLDKPFLEGAEARGLLNLKGHRSVGGMRASIYNALGLDAVEALVAYMAEFE 357          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_NEIG1 (Phosphoserine aminotransferase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=serC PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.056e-29
Identity = 64/132 (48.48%), Postives = 79/132 (59.85%), Query Frame = 1
Query:    1 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            H   + +YNTP  Y IYM GLVF +L   GG+ ++E +NR KA+ LY  IDGS GFY   +    RS MNV F     DL            +  LKG++SVGGMRASIYNAMPL GV  L  FM+DFQ ++
Sbjct:  236 HLNRDGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRLKAQTLYETIDGSGGFYINDIHPDARSKMNVVFKTASEDLDRRFVLEAELQGLCLLKGYKSVGGMRASIYNAMPLEGVRALADFMRDFQRRY 367          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_EDWI9 (Phosphoserine aminotransferase OS=Edwardsiella ictaluri (strain 93-146) GN=serC PE=3 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 6.056e-29
Identity = 65/130 (50.00%), Postives = 86/130 (66.15%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            E++S++NTPP +  Y+ G+VF++L E GG++E+ + N+ KA+LLY  IDG   FYR  V  + RS MNVPF +  S L            +  LKGH+  GGMRASIYNAMPLAGV+ LVAFM DF  +H
Sbjct:  234 ESDSMFNTPPTFAWYLSGMVFKWLKEQGGVSEMARRNQAKADLLYQAIDGGE-FYRNDVAPANRSRMNVPFQMVDSALDPLFWDEARKAGLHALKGHKVAGGMRASIYNAMPLAGVQALVAFMADFARRH 362          
The following BLAST results are available for this feature:
BLAST of CF504108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_LISIN3.551e-2949.21Phosphoserine aminotransferase OS=Listeria innocua... [more]
SERC_ECO273.551e-2951.15Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_BACAA3.551e-2947.73Phosphoserine aminotransferase OS=Bacillus anthrac... [more]
SERC_AZOSE3.551e-2951.54Phosphoserine aminotransferase OS=Azoarcus sp. (st... [more]
SERC_MARMS4.637e-2949.23Phosphoserine aminotransferase OS=Marinomonas sp. ... [more]
SERC_HUMAN4.637e-2948.87Phosphoserine aminotransferase OS=Homo sapiens GN=... [more]
SERC_XYLFT6.056e-2946.97Phosphoserine aminotransferase OS=Xylella fastidio... [more]
SERC_PSEA76.056e-2951.18Phosphoserine aminotransferase OS=Pseudomonas aeru... [more]
SERC_NEIG16.056e-2948.48Phosphoserine aminotransferase OS=Neisseria gonorr... [more]
SERC_EDWI96.056e-2950.00Phosphoserine aminotransferase OS=Edwardsiella ict... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-596 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504108 ID=CF504108; Name=CF504108; organism=Citrus sinensis; type=EST; length=418bp
CACGATGAAAACAATTCACTTTACAATACACCGCCTTGTTATTGTATCTA
CATGTGTGGATTAGTTTTTGAGTATTTGCTAGAATTGGGTGGGTTGAATG
AAGTTGAGAAGATGAACAGGAAGAAGGCTGAATTGTTATACAACGTCATT
GACGGAAGCAACGGGTTCTATAGATGCCCAGTTGAGAAATCTGTGAGGTC
ATTCATGAATGTGCCGTTTACTCTGGAGAAGTCTGATTTGGAAGCTGAGT
TTGTGAAGGAAGCTGCTAAGGAGAAGATGGTGCAATTGAAGGGGCATAGG
TCAGTTGGAGGAATGAGGGCTTCAATATATAATGCTATGCCTTTGGCTGG
CGTTGAGAAGTTGGTTGCTTTCATGAAGGATTTCCAGGCAAAGCATGCTT
GATTTTTGCTTTAGTGTT
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