CF504108

Overview
NameCF504108
Unique NameCF504108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_LACLA (Phosphoserine aminotransferase OS=Lactococcus lactis subsp. lactis GN=serC PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 7.910e-29
Identity = 65/128 (50.78%), Postives = 88/128 (68.75%), Query Frame = 1 
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVE-KSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 387
            EN S+YNTPP + IY+ GLVF+++   GG+ ++E+MN++KA+LLY++ID S+ FY+ P++ K  RS  NV FT    +L               LKGHRSVGGMRASIYNA PL GV +LV FMK+F+
Sbjct:  235 ENGSMYNTPPTFAIYVAGLVFKWVKAQGGVKKLEEMNQRKAQLLYDLIDQSD-FYQNPIKNKDERSICNVVFTSPSQELDELFTQKAEEKGFKSLKGHRSVGGMRASIYNAFPLEGVVELVKFMKEFE 361
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_AZOVD (Phosphoserine aminotransferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=serC PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 7.910e-29
Identity = 65/130 (50.00%), Postives = 83/130 (63.85%), Query Frame = 1 
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +N S+YNTP  +  Y+ GLVFE+L E GG+  + + NR K +LLY  IDGS GFY  P+    RS+MNVPF L    L            ++ LKGHRSVGGMRASIYNA+ L  VE LVA+M +F+ +H
Sbjct:  232 DNGSMYNTPATFSWYLSGLVFEWLKEQGGVEAMAQRNRAKKDLLYGFIDGS-GFYTNPIAVDARSWMNVPFRLADEKLDKPFLAGAEERGLLNLKGHRSVGGMRASIYNAVGLDAVEALVAYMAEFEKEH 360
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ACIBT (Phosphoserine aminotransferase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=serC PE=3 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 7.910e-29
Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 1 
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +N S+ NTP  Y  Y+ GLVFE+LLE GG++ + K+N +KA+LLY  ID S+ FY  P+    RS MNVPFTL    L            ++ L GHRSVGGMRASIYNA+PL GV+ L+ FM DF  ++
Sbjct:  230 KNGSMVNTPSTYAWYLSGLVFEWLLEQGGVDAIHKVNLEKAQLLYGYIDSSD-FYNNPIAIPNRSIMNVPFTLADEALEKQFLKEAEANHLLNLAGHRSVGGMRASIYNAVPLEGVQALIRFMDDFAKRN 358
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ACIBC (Phosphoserine aminotransferase OS=Acinetobacter baumannii (strain ACICU) GN=serC PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 7.910e-29
Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 1 
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +N S+ NTP  Y  Y+ GLVFE+LLE GG++ + K+N +KA+LLY  ID S+ FY  P+    RS MNVPFTL    L            ++ L GHRSVGGMRASIYNA+PL GV+ L+ FM DF  ++
Sbjct:  230 KNGSMVNTPSTYAWYLSGLVFEWLLEQGGVDAIHKVNLEKAQLLYGYIDSSD-FYNNPIAIPNRSIMNVPFTLADEALEKQFLKEAEENHLLNLAGHRSVGGMRASIYNAVPLEGVQALIRFMDDFAKRN 358
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ACIB5 (Phosphoserine aminotransferase OS=Acinetobacter baumannii (strain AB0057) GN=serC PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 7.910e-29
Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 1 
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +N S+ NTP  Y  Y+ GLVFE+LLE GG++ + K+N +KA+LLY  ID S+ FY  P+    RS MNVPFTL    L            ++ L GHRSVGGMRASIYNA+PL GV+ L+ FM DF  ++
Sbjct:  230 KNGSMVNTPSTYAWYLSGLVFEWLLEQGGVDAIHKVNLEKAQLLYGYIDSSD-FYNNPIAIPNRSIMNVPFTLADEALEKQFLKEAEANHLLNLAGHRSVGGMRASIYNAVPLEGVQALIRFMDDFAKRN 358
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ACIB3 (Phosphoserine aminotransferase OS=Acinetobacter baumannii (strain AB307-0294) GN=serC PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 7.910e-29
Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 1 
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +N S+ NTP  Y  Y+ GLVFE+LLE GG++ + K+N +KA+LLY  ID S+ FY  P+    RS MNVPFTL    L            ++ L GHRSVGGMRASIYNA+PL GV+ L+ FM DF  ++
Sbjct:  230 KNGSMVNTPSTYAWYLSGLVFEWLLEQGGVDAIHKVNLEKAQLLYGYIDSSD-FYNNPIAIPNRSIMNVPFTLADEALEKQFLKEAEANHLLNLAGHRSVGGMRASIYNAVPLEGVQALIRFMDDFAKRN 358
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_PSEST (Phosphoserine aminotransferase OS=Pseudomonas stutzeri GN=serC PE=3 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 1.033e-28
Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 1 
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +N S+YNTP  +  Y+ GLVFE+L E GG+  +E+ NR K ELLY  ID S  FY  P+ ++ RS+MNVPF L    L            ++ LKGHRSVGGMRASIYNA+ L  VE LVA+M +F+ +H
Sbjct:  232 DNGSMYNTPATFSWYLSGLVFEWLKEQGGVEVMEQRNRAKKELLYGFIDASE-FYTNPIAENARSWMNVPFRLADERLDKAFLAGADARGLLNLKGHRSVGGMRASIYNAVGLDAVEALVAYMAEFEKEH 360
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_CAMJE (Phosphoserine aminotransferase OS=Campylobacter jejuni GN=serC PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.033e-28
Identity = 66/134 (49.25%), Postives = 86/134 (64.18%), Query Frame = 1 
Query:    1 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKS-DLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 399
            H EN SL+NTPP + IYM  L  ++LL  GGL++V + N +KA +LY  ID SNGFY+   +K  RS MNV F + K+ DL            M+ LKGHR +GG+RASIYNA+ L  V+ L  FMK+FQ K+A
Sbjct:  225 HAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQGKYA 358
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_XYLFA (Phosphoserine aminotransferase OS=Xylella fastidiosa GN=serC PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.349e-28
Identity = 61/132 (46.21%), Postives = 86/132 (65.15%), Query Frame = 1 
Query:    1 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            H E +S+ NTPP +  Y+ GL  +++L  GG+ E  + N+ KA+L+Y  ID S GFYR  V  +VRS MN+PF L   +             ++ LKGH+++GG+RAS+YNAMPLAGV+ LVAFM DFQ ++
Sbjct:  230 HAERDSMLNTPPTFNWYLLGLTVKWMLAEGGVQEFARRNQAKAQLVYQTIDQSGGFYRNGVAAAVRSRMNIPFFLPNVEQDARFAAEAKAAGLLSLKGHKALGGIRASLYNAMPLAGVQALVAFMHDFQQRY 361
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_XANCP (Phosphoserine aminotransferase OS=Xanthomonas campestris pv. campestris GN=serC PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.349e-28
Identity = 62/132 (46.97%), Postives = 84/132 (63.64%), Query Frame = 1 
Query:    1 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            H   +S+ NTPP +  Y+ GL  +++LE GG+    + N +KA L+Y  IDGS GFYR  V  +VRS MN+PF L    L            ++ LKGH++VGG+RAS+YNAMP+AG + LVAFM DFQ +H
Sbjct:  229 HVARDSMLNTPPTWNWYLLGLTVKWMLEQGGVAAFAQRNAEKAALVYGAIDGSGGFYRNQVMPTVRSRMNIPFFLGDEQLDALFVSESKAAGLLALKGHKAVGGIRASLYNAMPVAGAQALVAFMHDFQQRH 360
The following BLAST results are available for this feature:
BLAST of CF504108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_LACLA7.910e-2950.78Phosphoserine aminotransferase OS=Lactococcus lact... [more]
SERC_AZOVD7.910e-2950.00Phosphoserine aminotransferase OS=Azotobacter vine... [more]
SERC_ACIBT7.910e-2950.00Phosphoserine aminotransferase OS=Acinetobacter ba... [more]
SERC_ACIBC7.910e-2950.00Phosphoserine aminotransferase OS=Acinetobacter ba... [more]
SERC_ACIB57.910e-2950.00Phosphoserine aminotransferase OS=Acinetobacter ba... [more]
SERC_ACIB37.910e-2950.00Phosphoserine aminotransferase OS=Acinetobacter ba... [more]
SERC_PSEST1.033e-2850.00Phosphoserine aminotransferase OS=Pseudomonas stut... [more]
SERC_CAMJE1.033e-2849.25Phosphoserine aminotransferase OS=Campylobacter je... [more]
SERC_XYLFA1.349e-2846.21Phosphoserine aminotransferase OS=Xylella fastidio... [more]
SERC_XANCP1.349e-2846.97Phosphoserine aminotransferase OS=Xanthomonas camp... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-596 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504108 ID=CF504108; Name=CF504108; organism=Citrus sinensis; type=EST; length=418bp
CACGATGAAAACAATTCACTTTACAATACACCGCCTTGTTATTGTATCTA
CATGTGTGGATTAGTTTTTGAGTATTTGCTAGAATTGGGTGGGTTGAATG
AAGTTGAGAAGATGAACAGGAAGAAGGCTGAATTGTTATACAACGTCATT
GACGGAAGCAACGGGTTCTATAGATGCCCAGTTGAGAAATCTGTGAGGTC
ATTCATGAATGTGCCGTTTACTCTGGAGAAGTCTGATTTGGAAGCTGAGT
TTGTGAAGGAAGCTGCTAAGGAGAAGATGGTGCAATTGAAGGGGCATAGG
TCAGTTGGAGGAATGAGGGCTTCAATATATAATGCTATGCCTTTGGCTGG
CGTTGAGAAGTTGGTTGCTTTCATGAAGGATTTCCAGGCAAAGCATGCTT
GATTTTTGCTTTAGTGTT
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