CF504108

Overview
NameCF504108
Unique NameCF504108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_BACHK (Phosphoserine aminotransferase OS=Bacillus thuringiensis subsp. konkukian GN=serC PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.211e-30
Identity = 63/132 (47.73%), Postives = 89/132 (67.42%), Query Frame = 1
Query:    1 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            + +NNSLYNTPP + IY+  +V E+L E GG++ +E+ N+ K+ LLYN +D S   +  PV+ + RS MN+PFT    +L            +V LKGHRSVGGMRASIYNAMP  GV++LV +MK+F+ ++
Sbjct:  229 YSKNNSLYNTPPSFSIYVTKIVLEWLKEQGGVSAIEEQNKMKSSLLYNFLDESK-LFTSPVDPTYRSLMNIPFTTPSEELNNEFLQKAKERGLVTLKGHRSVGGMRASIYNAMPAHGVQQLVNYMKEFELEN 359          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_YERPY (Phosphoserine aminotransferase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=serC PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.194e-30
Identity = 66/130 (50.77%), Postives = 87/130 (66.92%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +N+S++NTPP +  Y+ GLVF++L E GGL E+EK N+ KAELLY  ID + GFYR  V  + RS+MNVPF + ++ L            +  LKGHR  GGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  232 DNDSMFNTPPTFAWYLSGLVFKWLKEQGGLGEMEKRNQAKAELLYGAIDRT-GFYRNQVAIANRSWMNVPFQMAEASLDKLFLSEAEAQGLQALKGHRVAGGMRASIYNAMPIEGVKALTDFMADFERRH 360          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_YERPS (Phosphoserine aminotransferase OS=Yersinia pseudotuberculosis GN=serC PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.194e-30
Identity = 66/130 (50.77%), Postives = 87/130 (66.92%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +N+S++NTPP +  Y+ GLVF++L E GGL E+EK N+ KAELLY  ID + GFYR  V  + RS+MNVPF + ++ L            +  LKGHR  GGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  232 DNDSMFNTPPTFAWYLSGLVFKWLKEQGGLGEMEKRNQAKAELLYGAIDRT-GFYRNQVAIANRSWMNVPFQMAEASLDKLFLSEAEAQGLQALKGHRVAGGMRASIYNAMPIEGVKALTDFMADFERRH 360          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_YERPB (Phosphoserine aminotransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=serC PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.194e-30
Identity = 66/130 (50.77%), Postives = 87/130 (66.92%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +N+S++NTPP +  Y+ GLVF++L E GGL E+EK N+ KAELLY  ID + GFYR  V  + RS+MNVPF + ++ L            +  LKGHR  GGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  232 DNDSMFNTPPTFAWYLSGLVFKWLKEQGGLGEMEKRNQAKAELLYGAIDRT-GFYRNQVAIANRSWMNVPFQMAEASLDKLFLSEAEAQGLQALKGHRVAGGMRASIYNAMPIEGVKALTDFMADFERRH 360          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_YERP3 (Phosphoserine aminotransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=serC PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.194e-30
Identity = 66/130 (50.77%), Postives = 87/130 (66.92%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +N+S++NTPP +  Y+ GLVF++L E GGL E+EK N+ KAELLY  ID + GFYR  V  + RS+MNVPF + ++ L            +  LKGHR  GGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  232 DNDSMFNTPPTFAWYLSGLVFKWLKEQGGLGEMEKRNQAKAELLYGAIDRT-GFYRNQVAIANRSWMNVPFQMAEASLDKLFLSEAEAQGLQALKGHRVAGGMRASIYNAMPIEGVKALTDFMADFERRH 360          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_BORA1 (Phosphoserine aminotransferase OS=Bordetella avium (strain 197N) GN=serC PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.194e-30
Identity = 65/128 (50.78%), Postives = 86/128 (67.19%), Query Frame = 1
Query:   13 NSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +S YNTPP + IY+ GLV++++   GG+  +E  N+ KA+LLY  +D S GFYR PV  +VRS MNVPF L    L            ++ LKGH+SVGGMRASIYNAMPLAGV+ LV ++K+F+  H
Sbjct:  249 HSRYNTPPTFAIYVAGLVYKWVKAQGGVQGLEAANKAKADLLYGYLDAS-GFYRNPVHPAVRSRMNVPFVLHDESLNDAFLKGAEAAGLLALKGHKSVGGMRASIYNAMPLAGVQALVDYLKEFERLH 375          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_VIBPA (Phosphoserine aminotransferase OS=Vibrio parahaemolyticus GN=serC PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.478e-30
Identity = 68/131 (51.91%), Postives = 87/131 (66.41%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 399
            E  S++NTPP +  Y+ GLVF++L   GG+  +E +NR+KA+LLY+ ID S+ FYR  V  S RS MNVPF L K +L            +  LKGHR VGGMRASIYNAMPL GV+ LV FMK+F+  +A
Sbjct:  235 EKESMFNTPPTFAWYLSGLVFKWLKAQGGVKSIETVNREKAKLLYDYIDQSD-FYRNGVHPSNRSLMNVPFQLAKPELDATFLELADAKGLKALKGHRVVGGMRASIYNAMPLEGVQALVDFMKEFEQNYA 364          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_VIBFM (Phosphoserine aminotransferase OS=Vibrio fischeri (strain MJ11) GN=serC PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.478e-30
Identity = 68/130 (52.31%), Postives = 85/130 (65.38%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +  S++NTPP Y  Y+ GLVF++L   GG++ +E  NRKKA +LY+ ID S+ FYR  V    RS MNVPF L  S+L            +  LKGHR VGGMRASIYNAMPL GVE LV FMK+F+ K+
Sbjct:  231 DKESMFNTPPTYAWYLAGLVFKWLKSNGGIDAMETHNRKKAAVLYDYIDQSD-FYRNDVHSDNRSLMNVPFQLANSELDTKFLELADEAGLKALKGHRVVGGMRASIYNAMPLEGVEALVQFMKEFEEKY 359          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_SERP5 (Phosphoserine aminotransferase OS=Serratia proteamaculans (strain 568) GN=serC PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.478e-30
Identity = 70/130 (53.85%), Postives = 86/130 (66.15%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            EN+S++NTPP +  Y+ GLVF++L E GGL E+ K N+ KAELLY  ID S+ FYR  V  + RS+MNVPF L    L            +  LKGHR VGGMRASIYNAMPLAGV+ L  FM DF+ +H
Sbjct:  232 ENDSMFNTPPTFAWYLSGLVFKWLKEQGGLVEMHKRNQAKAELLYATIDKSD-FYRSRVALANRSWMNVPFQLADPALDKVFLSEAEAIGLQALKGHRVVGGMRASIYNAMPLAGVKTLTDFMVDFERRH 360          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_PECCP (Phosphoserine aminotransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=serC PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.478e-30
Identity = 68/130 (52.31%), Postives = 87/130 (66.92%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +N+S++NTPP +  Y+ G+VF++L E GGL E+EK N++KA+LLY+ IDG N FYR  V  + RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM DF  +H
Sbjct:  232 DNDSMFNTPPTFAWYLSGMVFKWLKEHGGLAEMEKRNQEKADLLYSAIDG-NDFYRNDVAVANRSRMNVPFLLADAALDKVFLEESVAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTEFMADFARRH 360          
The following BLAST results are available for this feature:
BLAST of CF504108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_BACHK3.211e-3047.73Phosphoserine aminotransferase OS=Bacillus thuring... [more]
SERC_YERPY4.194e-3050.77Phosphoserine aminotransferase OS=Yersinia pseudot... [more]
SERC_YERPS4.194e-3050.77Phosphoserine aminotransferase OS=Yersinia pseudot... [more]
SERC_YERPB4.194e-3050.77Phosphoserine aminotransferase OS=Yersinia pseudot... [more]
SERC_YERP34.194e-3050.77Phosphoserine aminotransferase OS=Yersinia pseudot... [more]
SERC_BORA14.194e-3050.78Phosphoserine aminotransferase OS=Bordetella avium... [more]
SERC_VIBPA5.478e-3051.91Phosphoserine aminotransferase OS=Vibrio parahaemo... [more]
SERC_VIBFM5.478e-3052.31Phosphoserine aminotransferase OS=Vibrio fischeri ... [more]
SERC_SERP55.478e-3053.85Phosphoserine aminotransferase OS=Serratia proteam... [more]
SERC_PECCP5.478e-3052.31Phosphoserine aminotransferase OS=Pectobacterium c... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-596 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504108 ID=CF504108; Name=CF504108; organism=Citrus sinensis; type=EST; length=418bp
CACGATGAAAACAATTCACTTTACAATACACCGCCTTGTTATTGTATCTA
CATGTGTGGATTAGTTTTTGAGTATTTGCTAGAATTGGGTGGGTTGAATG
AAGTTGAGAAGATGAACAGGAAGAAGGCTGAATTGTTATACAACGTCATT
GACGGAAGCAACGGGTTCTATAGATGCCCAGTTGAGAAATCTGTGAGGTC
ATTCATGAATGTGCCGTTTACTCTGGAGAAGTCTGATTTGGAAGCTGAGT
TTGTGAAGGAAGCTGCTAAGGAGAAGATGGTGCAATTGAAGGGGCATAGG
TCAGTTGGAGGAATGAGGGCTTCAATATATAATGCTATGCCTTTGGCTGG
CGTTGAGAAGTTGGTTGCTTTCATGAAGGATTTCCAGGCAAAGCATGCTT
GATTTTTGCTTTAGTGTT
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