CF504108

Overview
NameCF504108
Unique NameCF504108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ECO57 (Phosphoserine aminotransferase OS=Escherichia coli O157:H7 GN=serC PE=3 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 7.154e-30
Identity = 68/131 (51.91%), Postives = 89/131 (67.94%), Query Frame = 1 
Query:    4 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            ++N S++NTPP +  Y+ GLVF++L   GG+ E++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  232 NDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ECO55 (Phosphoserine aminotransferase OS=Escherichia coli (strain 55989 / EAEC) GN=serC PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 7.154e-30
Identity = 68/131 (51.91%), Postives = 89/131 (67.94%), Query Frame = 1 
Query:    4 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            ++N S++NTPP +  Y+ GLVF++L   GG+ E++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  232 NDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ECO24 (Phosphoserine aminotransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=serC PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 7.154e-30
Identity = 68/131 (51.91%), Postives = 89/131 (67.94%), Query Frame = 1 
Query:    4 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            ++N S++NTPP +  Y+ GLVF++L   GG+ E++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  232 NDNGSMFNTPPTFAWYLSGLVFKWLRANGGVAEMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_CHRVO (Phosphoserine aminotransferase OS=Chromobacterium violaceum GN=serC PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 7.154e-30
Identity = 66/132 (50.00%), Postives = 85/132 (64.39%), Query Frame = 1 
Query:    1 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            H + +S+YNTP  Y IY+ GLVF++L E GG+  +   N +KA LLY+VID S GFY   +E+  RS MNV F L    L            + QLKGHR+VGGMRASIYNAMP+ GV+ LV FM+DF  ++
Sbjct:  230 HADADSMYNTPGTYPIYIAGLVFKWLKEQGGVKGIATRNEEKAGLLYHVIDSSGGFYSTHIEQPFRSKMNVVFKLRDEALDEIFLLEARKNGLAQLKGHRAVGGMRASIYNAMPIEGVKSLVNFMQDFARQY 361
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_BACSU (Phosphoserine aminotransferase OS=Bacillus subtilis GN=serC PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 7.154e-30
Identity = 68/132 (51.52%), Postives = 84/132 (63.64%), Query Frame = 1 
Query:    1 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            H + +SLYNTPP + IYM  LV E+L E GG+  VE+ N +KA++LY+ ID SNGFY+    K  RS MNV FTL   +L            M+ L GHRSVGG RASIYNA+ L   EKL AFMK FQ ++
Sbjct:  227 HVKADSLYNTPPTFAIYMLSLVLEWLKENGGVEAVEQRNEQKAQVLYSCIDESNGFYKGHARKDSRSRMNVTFTLRDDELTKTFVQKAKDAKMIGLGGHRSVGGCRASIYNAVSLEDCEKLAAFMKKFQQEN 358
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_PSEAE (Phosphoserine aminotransferase OS=Pseudomonas aeruginosa GN=serC PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.344e-30
Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 1 
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +N S+YNTP  Y  Y+ GLVFE+L E GG+  +E+ NR K +LLY  ID S+ FY  P++ S RS+MNVPF L    L            ++ LKGHRSVGGMRASIYNA+ L  VE LVA+M +F+ +H
Sbjct:  232 DNGSMYNTPATYSWYLSGLVFEWLKEQGGVTAMEQRNRAKKDLLYKTIDASD-FYTNPIQPSARSWMNVPFRLADERLDKPFLEGAEARGLLNLKGHRSVGGMRASIYNALGLDAVEALVAYMAEFEKEH 360
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_PSEAB (Phosphoserine aminotransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=serC PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.344e-30
Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 1 
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +N S+YNTP  Y  Y+ GLVFE+L E GG+  +E+ NR K +LLY  ID S+ FY  P++ S RS+MNVPF L    L            ++ LKGHRSVGGMRASIYNA+ L  VE LVA+M +F+ +H
Sbjct:  232 DNGSMYNTPATYSWYLSGLVFEWLKEQGGVTAMEQRNRAKKDLLYKTIDASD-FYTNPIQPSARSWMNVPFRLADERLDKPFLEGAEARGLLNLKGHRSVGGMRASIYNALGLDAVEALVAYMAEFEKEH 360
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_PSEA8 (Phosphoserine aminotransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=serC PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.344e-30
Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 1 
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +N S+YNTP  Y  Y+ GLVFE+L E GG+  +E+ NR K +LLY  ID S+ FY  P++ S RS+MNVPF L    L            ++ LKGHRSVGGMRASIYNA+ L  VE LVA+M +F+ +H
Sbjct:  232 DNGSMYNTPATYSWYLSGLVFEWLKEQGGVTAMEQRNRAKKDLLYKTIDASD-FYTNPIQPSARSWMNVPFRLADERLDKPFLEGAEARGLLNLKGHRSVGGMRASIYNALGLDAVEALVAYMAEFEKEH 360
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ERWT9 (Phosphoserine aminotransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=serC PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.344e-30
Identity = 68/130 (52.31%), Postives = 87/130 (66.92%), Query Frame = 1 
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            EN+S++NTPP +  Y+ GLVF++L E GG+ E++K N+ KA+LLY  ID S+ FYR  V  + RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMPLAGV+ L  FM DF+ +H
Sbjct:  232 ENDSMFNTPPTFAWYLSGLVFKWLKEQGGVGELDKRNQAKADLLYGTIDSSD-FYRNDVAVANRSRMNVPFQLADAALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLAGVKTLTDFMIDFERRH 360
[Close]
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ECOLU (Phosphoserine aminotransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.344e-30
Identity = 68/131 (51.91%), Postives = 89/131 (67.94%), Query Frame = 1 
Query:    4 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            ++N S++NTPP +  Y+ GLVF++L   GG+ E++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  232 NDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMIEFERRH 361
The following BLAST results are available for this feature:
BLAST of CF504108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_ECO577.154e-3051.91Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO557.154e-3051.91Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO247.154e-3051.91Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_CHRVO7.154e-3050.00Phosphoserine aminotransferase OS=Chromobacterium ... [more]
SERC_BACSU7.154e-3051.52Phosphoserine aminotransferase OS=Bacillus subtili... [more]
SERC_PSEAE9.344e-3050.77Phosphoserine aminotransferase OS=Pseudomonas aeru... [more]
SERC_PSEAB9.344e-3050.77Phosphoserine aminotransferase OS=Pseudomonas aeru... [more]
SERC_PSEA89.344e-3050.77Phosphoserine aminotransferase OS=Pseudomonas aeru... [more]
SERC_ERWT99.344e-3052.31Phosphoserine aminotransferase OS=Erwinia tasmanie... [more]
SERC_ECOLU9.344e-3051.91Phosphoserine aminotransferase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-596 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504108 ID=CF504108; Name=CF504108; organism=Citrus sinensis; type=EST; length=418bp
CACGATGAAAACAATTCACTTTACAATACACCGCCTTGTTATTGTATCTA
CATGTGTGGATTAGTTTTTGAGTATTTGCTAGAATTGGGTGGGTTGAATG
AAGTTGAGAAGATGAACAGGAAGAAGGCTGAATTGTTATACAACGTCATT
GACGGAAGCAACGGGTTCTATAGATGCCCAGTTGAGAAATCTGTGAGGTC
ATTCATGAATGTGCCGTTTACTCTGGAGAAGTCTGATTTGGAAGCTGAGT
TTGTGAAGGAAGCTGCTAAGGAGAAGATGGTGCAATTGAAGGGGCATAGG
TCAGTTGGAGGAATGAGGGCTTCAATATATAATGCTATGCCTTTGGCTGG
CGTTGAGAAGTTGGTTGCTTTCATGAAGGATTTCCAGGCAAAGCATGCTT
GATTTTTGCTTTAGTGTT
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