CF504108

Overview
NameCF504108
Unique NameCF504108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_YERPP (Phosphoserine aminotransferase OS=Yersinia pestis (strain Pestoides F) GN=serC PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.594e-29
Identity = 66/130 (50.77%), Postives = 86/130 (66.15%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +N+S++NTPP +  Y+ GLVF++L E GGL E+EK N+ KAELLY  ID + GFYR  V  + RS+MNVPF +  + L            +  LKGHR  GGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  232 DNDSMFNTPPTFAWYLSGLVFKWLKEQGGLCEMEKRNQAKAELLYGAIDRT-GFYRNQVAITNRSWMNVPFQMADASLDKLFLREAEAQGLQALKGHRVAGGMRASIYNAMPIEGVKALTDFMADFERRH 360          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_STRSY (Phosphoserine aminotransferase OS=Streptococcus suis (strain 05ZYH33) GN=serC PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.594e-29
Identity = 67/132 (50.76%), Postives = 88/132 (66.67%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPV-EKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 399
            EN+SLYNTPP Y IY+  LVFE++ E+GG++E+EK+NR+K+ LLY+ ID SN FY  PV +K  RS  N+PF     +L               +KGHRSVGGMRAS+YNA P  GV +L+ FMK F  ++A
Sbjct:  233 ENDSLYNTPPAYSIYISKLVFEWVKEIGGVDEMEKINREKSGLLYDYIDQSN-FYTNPVRKKEERSVANIPFVSPSEELDAKFVKEATAAGFKNIKGHRSVGGMRASLYNAFPRQGVVELIEFMKKFAVENA 363          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_STRS2 (Phosphoserine aminotransferase OS=Streptococcus suis (strain 98HAH33) GN=serC PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.594e-29
Identity = 67/132 (50.76%), Postives = 88/132 (66.67%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPV-EKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 399
            EN+SLYNTPP Y IY+  LVFE++ E+GG++E+EK+NR+K+ LLY+ ID SN FY  PV +K  RS  N+PF     +L               +KGHRSVGGMRAS+YNA P  GV +L+ FMK F  ++A
Sbjct:  233 ENDSLYNTPPAYSIYISKLVFEWVKEIGGVDEMEKINREKSGLLYDYIDQSN-FYTNPVRKKEERSVANIPFVSPSEELDAKFVKEATAAGFKNIKGHRSVGGMRASLYNAFPRQGVVELIEFMKKFAVENA 363          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_VIBF1 (Phosphoserine aminotransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=serC PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.082e-29
Identity = 67/130 (51.54%), Postives = 84/130 (64.62%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +  S++NTPP Y  Y+ GLVF++L   GG++ +E  NRKKA +LY+ ID S+ FYR  V    RS MNVPF L   +L            +  LKGHR VGGMRASIYNAMPL GVE LV FMK+F+ K+
Sbjct:  231 DKESMFNTPPTYAWYLAGLVFKWLKSNGGIDAMETHNRKKAAVLYDYIDQSD-FYRNDVHSDNRSLMNVPFQLANPELDTKFLELADEAGLKALKGHRVVGGMRASIYNAMPLEGVEALVQFMKEFEEKY 359          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_VESOH (Phosphoserine aminotransferase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=serC PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.082e-29
Identity = 65/131 (49.62%), Postives = 88/131 (67.18%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 399
            +N+S+YNTP  Y  Y+   VFE+L + GGL+ + K+N+ KA+ LY+VIDGSN FY  PV    RS+MNVPF L   +L            ++ LKGHRSVGGMRASIYNAMP  G+ +L+ FMK F+ +++
Sbjct:  230 KNDSMYNTPSTYSWYVASRVFEWLKQQGGLSVIAKINQTKAKTLYDVIDGSN-FYSNPVALKYRSWMNVPFLLADENLNGLFVEKAAINNLITLKGHRSVGGMRASIYNAMPQKGINELINFMKVFEKENS 359          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_POLNA (Phosphoserine aminotransferase OS=Polaromonas naphthalenivorans (strain CJ2) GN=serC PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.082e-29
Identity = 69/136 (50.74%), Postives = 88/136 (64.71%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLL-----ELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 399
            +N+S+YNTPP Y IY+ GL F++L      E  G+  +EK N  KA+LLY+ ID S G Y   V K  RS MNVPF L                 ++QLKGH+SVGGMRASIYNAMPLAGVE LV+++++F+ KHA
Sbjct:  234 DNDSMYNTPPTYAIYIAGLTFQWLKRQKEGEATGIAAMEKHNLAKAKLLYDAIDHS-GLYINKVSKDCRSRMNVPFLLRDESRNEDFLAGAKARGLLQLKGHKSVGGMRASIYNAMPLAGVEALVSYLQEFEQKHA 368          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_GEOKA (Phosphoserine aminotransferase OS=Geobacillus kaustophilus GN=serC PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.082e-29
Identity = 65/133 (48.87%), Postives = 83/133 (62.41%), Query Frame = 1
Query:    1 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 399
            H ++NSLYNTPP + IYM  LV E++ E GG+  +E+ N++KA +LY  ID S GFY+   EK  RS MNV FTL   +L             V L GHRSVGG RASIYNA+PL   E L +FM +F+ + A
Sbjct:  228 HQKSNSLYNTPPTFAIYMLSLVLEWVEEQGGVAAMEERNQQKAAVLYEAIDESGGFYKPHAEKGSRSLMNVTFTLPNEELTKTFLAEAKERGFVGLGGHRSVGGCRASIYNAVPLEACEALASFMNEFRRRFA 360          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_BORPD (Phosphoserine aminotransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=serC PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.082e-29
Identity = 65/128 (50.78%), Postives = 83/128 (64.84%), Query Frame = 1
Query:   13 NSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            +S YNTPP + IY+ GLVF+++   GG+  +E  NR KAELLY  +D S  FY  PV   VRS MNVPF L    L            ++QLKGH+SVGGMRASIYNAMPL GV  LV +++DF+ ++
Sbjct:  249 HSRYNTPPAFAIYIAGLVFKWVKAQGGVAGMEAANRAKAELLYGYLD-STSFYHNPVHAPVRSRMNVPFVLRDESLNDAFLQGAEAAGLMQLKGHKSVGGMRASIYNAMPLEGVRALVEYLRDFERRY 375          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_XANC5 (Phosphoserine aminotransferase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.719e-29
Identity = 61/132 (46.21%), Postives = 85/132 (64.39%), Query Frame = 1
Query:    1 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            H   +S+ NTPP +  Y+ GL  +++LE GG+ E  + N +KA L+Y  IDGS GFYR  ++ +VRS MN+PF L    L            ++ LKGH++VGG+RAS+YNAMP+AG + L AFM DFQ +H
Sbjct:  229 HAARDSMLNTPPTWNWYVLGLTVKWMLEQGGVQEFARRNAEKAALVYGAIDGSGGFYRNLIKPAVRSRMNIPFFLPDEQLDALFVSESKAAGLLALKGHKAVGGIRASLYNAMPVAGAQALAAFMHDFQQRH 360          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_STRSV (Phosphoserine aminotransferase OS=Streptococcus sanguinis (strain SK36) GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.719e-29
Identity = 66/132 (50.00%), Postives = 88/132 (66.67%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVE-KSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 399
            +N SLYNTPP + IYM  LVFE++ ELGG+ E+EK NR+K+ LLY+ I+ S+ FYR PV  K  RS  N+PF     +L               +KGHRSVGGMRAS+YNA PL GV+ L+AFM+ F+ +++
Sbjct:  233 DNGSLYNTPPTFAIYMAKLVFEWVKELGGVAEMEKRNREKSGLLYDFIEQSD-FYRSPVRYKEQRSVANIPFVSPSPELDAKFNKEATAAGFKNIKGHRSVGGMRASLYNAFPLQGVKDLIAFMQKFEKENS 363          
The following BLAST results are available for this feature:
BLAST of CF504108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_YERPP1.594e-2950.77Phosphoserine aminotransferase OS=Yersinia pestis ... [more]
SERC_STRSY1.594e-2950.76Phosphoserine aminotransferase OS=Streptococcus su... [more]
SERC_STRS21.594e-2950.76Phosphoserine aminotransferase OS=Streptococcus su... [more]
SERC_VIBF12.082e-2951.54Phosphoserine aminotransferase OS=Vibrio fischeri ... [more]
SERC_VESOH2.082e-2949.62Phosphoserine aminotransferase OS=Vesicomyosocius ... [more]
SERC_POLNA2.082e-2950.74Phosphoserine aminotransferase OS=Polaromonas naph... [more]
SERC_GEOKA2.082e-2948.87Phosphoserine aminotransferase OS=Geobacillus kaus... [more]
SERC_BORPD2.082e-2950.78Phosphoserine aminotransferase OS=Bordetella petri... [more]
SERC_XANC52.719e-2946.21Phosphoserine aminotransferase OS=Xanthomonas camp... [more]
SERC_STRSV2.719e-2950.00Phosphoserine aminotransferase OS=Streptococcus sa... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-596 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504108 ID=CF504108; Name=CF504108; organism=Citrus sinensis; type=EST; length=418bp
CACGATGAAAACAATTCACTTTACAATACACCGCCTTGTTATTGTATCTA
CATGTGTGGATTAGTTTTTGAGTATTTGCTAGAATTGGGTGGGTTGAATG
AAGTTGAGAAGATGAACAGGAAGAAGGCTGAATTGTTATACAACGTCATT
GACGGAAGCAACGGGTTCTATAGATGCCCAGTTGAGAAATCTGTGAGGTC
ATTCATGAATGTGCCGTTTACTCTGGAGAAGTCTGATTTGGAAGCTGAGT
TTGTGAAGGAAGCTGCTAAGGAGAAGATGGTGCAATTGAAGGGGCATAGG
TCAGTTGGAGGAATGAGGGCTTCAATATATAATGCTATGCCTTTGGCTGG
CGTTGAGAAGTTGGTTGCTTTCATGAAGGATTTCCAGGCAAAGCATGCTT
GATTTTTGCTTTAGTGTT
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