CF504108

Overview
NameCF504108
Unique NameCF504108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_RALPJ (Phosphoserine aminotransferase OS=Ralstonia pickettii (strain 12J) GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.719e-29
Identity = 65/127 (51.18%), Postives = 84/127 (66.14%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 387
            EN S+YNTPP Y IY+ GLVF+++   GG+  +E  N  K+++LY+ ID S+ FYR  +  + RS MNVPF L                 +VQLKGH+SVGGMRASIYNAMPL GVE LV FM++F+
Sbjct:  249 ENGSMYNTPPTYAIYIAGLVFQWIKRQGGVEALETRNIIKSKMLYDFIDASS-FYRNEIHPTCRSRMNVPFFLNDESRSEAFLAQARERGLVQLKGHKSVGGMRASIYNAMPLEGVEALVDFMREFE 374          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_PROMH (Phosphoserine aminotransferase OS=Proteus mirabilis (strain HI4320) GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.719e-29
Identity = 66/131 (50.38%), Postives = 84/131 (64.12%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 399
            EN+S++NTPP +  Y+ G+VF++L E GGL E+ K N +KA LLY+ ID S+ FY   +    RS MNVPF +    L            +V LKGHR  GGMRASIYNAMP AGV+ LV FM DF+ +HA
Sbjct:  233 ENDSMFNTPPTFAWYLSGMVFKWLKEQGGLQEIAKRNYEKATLLYSAIDNSD-FYINRIATENRSLMNVPFQMSSPALDAVFLKEAEEQGLVALKGHRVSGGMRASIYNAMPFAGVQALVDFMADFERRHA 362          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ENTS8 (Phosphoserine aminotransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.719e-29
Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = 1
Query:    7 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            EN+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KA+LLY VID S+ FYR  V  + RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM DF+ +H
Sbjct:  232 ENDSMFNTPPTFAWYLAGLVFKWLKTNGGVAAMDKINQQKADLLYGVIDNSD-FYRNDVATANRSRMNVPFQLADSSLDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVDFERRH 360          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ECOUT (Phosphoserine aminotransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.719e-29
Identity = 67/131 (51.15%), Postives = 89/131 (67.94%), Query Frame = 1
Query:    4 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  232 NDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ECOL6 (Phosphoserine aminotransferase OS=Escherichia coli O6 GN=serC PE=3 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 2.719e-29
Identity = 67/131 (51.15%), Postives = 89/131 (67.94%), Query Frame = 1
Query:    4 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  232 NDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ECOL5 (Phosphoserine aminotransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.719e-29
Identity = 67/131 (51.15%), Postives = 89/131 (67.94%), Query Frame = 1
Query:    4 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  232 NDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ECOK1 (Phosphoserine aminotransferase OS=Escherichia coli O1:K1 / APEC GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.719e-29
Identity = 67/131 (51.15%), Postives = 89/131 (67.94%), Query Frame = 1
Query:    4 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  232 NDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ECO81 (Phosphoserine aminotransferase OS=Escherichia coli O81 (strain ED1a) GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.719e-29
Identity = 67/131 (51.15%), Postives = 89/131 (67.94%), Query Frame = 1
Query:    4 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  232 NDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ECO7I (Phosphoserine aminotransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.719e-29
Identity = 67/131 (51.15%), Postives = 89/131 (67.94%), Query Frame = 1
Query:    4 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  232 NDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CF504108 vs. ExPASy Swiss-Prot
Match: SERC_ECO45 (Phosphoserine aminotransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.719e-29
Identity = 67/131 (51.15%), Postives = 89/131 (67.94%), Query Frame = 1
Query:    4 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 396
            ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  232 NDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
The following BLAST results are available for this feature:
BLAST of CF504108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_RALPJ2.719e-2951.18Phosphoserine aminotransferase OS=Ralstonia picket... [more]
SERC_PROMH2.719e-2950.38Phosphoserine aminotransferase OS=Proteus mirabili... [more]
SERC_ENTS82.719e-2951.54Phosphoserine aminotransferase OS=Enterobacter sak... [more]
SERC_ECOUT2.719e-2951.15Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECOL62.719e-2951.15Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECOL52.719e-2951.15Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECOK12.719e-2951.15Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO812.719e-2951.15Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO7I2.719e-2951.15Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO452.719e-2951.15Phosphoserine aminotransferase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-596 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504108 ID=CF504108; Name=CF504108; organism=Citrus sinensis; type=EST; length=418bp
CACGATGAAAACAATTCACTTTACAATACACCGCCTTGTTATTGTATCTA
CATGTGTGGATTAGTTTTTGAGTATTTGCTAGAATTGGGTGGGTTGAATG
AAGTTGAGAAGATGAACAGGAAGAAGGCTGAATTGTTATACAACGTCATT
GACGGAAGCAACGGGTTCTATAGATGCCCAGTTGAGAAATCTGTGAGGTC
ATTCATGAATGTGCCGTTTACTCTGGAGAAGTCTGATTTGGAAGCTGAGT
TTGTGAAGGAAGCTGCTAAGGAGAAGATGGTGCAATTGAAGGGGCATAGG
TCAGTTGGAGGAATGAGGGCTTCAATATATAATGCTATGCCTTTGGCTGG
CGTTGAGAAGTTGGTTGCTTTCATGAAGGATTTCCAGGCAAAGCATGCTT
GATTTTTGCTTTAGTGTT
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