CF504110

Overview
NameCF504110
Unique NameCF504110
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length481
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504110 vs. ExPASy Swiss-Prot
Match: ERF62_ARATH (Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana GN=ERF062 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.122e-18
Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = 1
Query:  172 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGG------RSLKPSEIQAV-AAQFANS---EPLRSQSPEQSVSELQTE 477
            Y+GVR+R WGK+V+EIRLP +R R+WLG+++TAE+AA A+D A + LRG  A  NFPD    +  G       SL  S+IQ + ++Q +NS    P +  +PEQ    ++ E
Sbjct:  232 YRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNFPDLKHQLKSGSLRCMIASLLESKIQQISSSQVSNSPSPPPPKVGTPEQKNHHMKME 343          
BLAST of CF504110 vs. ExPASy Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.383e-18
Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = 1
Query:  142 EKPAEGSDSR--YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVS 462
            +KP + S     Y+GVRKR WGK+VSEIR P  ++RIWLG++ + E AARA D A   ++G SA  NFPD         SL P +IQ  A + A+ E  +S S   S++
Sbjct:   24 KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLT 132          
BLAST of CF504110 vs. ExPASy Swiss-Prot
Match: ERF10_ARATH (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF010 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.031e-18
Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 1
Query:  163 DSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPP 354
            D  YKG+R RKWGK+V+EIR PN R+R+WLGSY T E AARA+D A+F LRG +A+ NFP+  P
Sbjct:   18 DRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFPELLP 81          
BLAST of CF504110 vs. ExPASy Swiss-Prot
Match: ERF08_ARATH (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana GN=ERF008 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.183e-18
Identity = 40/58 (68.97%), Postives = 48/58 (82.76%), Query Frame = 1
Query:  172 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPD 345
            YKG+R RKWGK+V+EIR PN R+RIWLGSY T E AARA+D A+F LRG SA+ NFP+
Sbjct:   28 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLNFPE 85          
BLAST of CF504110 vs. ExPASy Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.566e-17
Identity = 50/134 (37.31%), Postives = 72/134 (53.73%), Query Frame = 1
Query:   64 NSIQHHSSKS-RIPIT*SPLKMVKHAVEKPAEGSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVS 462
            +S  H S ++ R P+     K  K   E+        ++GVR R+WGK+VSEIR P  ++RIWLG++ T E AARA D A   ++G SA  NFP+    +    S  P +IQ  AA  A  +    +SP  +V+
Sbjct:    3 DSSSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAVDWKAPESPSSTVT 136          
BLAST of CF504110 vs. ExPASy Swiss-Prot
Match: ERF21_ARATH (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.566e-17
Identity = 45/112 (40.18%), Postives = 68/112 (60.71%), Query Frame = 1
Query:  142 EKPAEGSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTE 477
            +   +G  S Y+GVRKRKWGK+VSEIR P ++ RIWLGS++T E AA A+D A F  RGR A+ NFP+    +      +P++  + + + A  E    ++ E + S +Q +
Sbjct:   14 QNDGKGVPSAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPELASSLP-----RPADSSSDSIRMAVHEATLCRTTEGTESAMQVD 120          
BLAST of CF504110 vs. ExPASy Swiss-Prot
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.046e-17
Identity = 50/134 (37.31%), Postives = 82/134 (61.19%), Query Frame = 1
Query:   55 FRVNSIQHHSSKSRIPIT*-SPLKMVKHAVEKPAEGSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPD-NPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPE 450
            ++++ IQ+  +  R  I+  SP ++    +      + + Y+GVR+R WGK+V+EIRLP +R R+WLG+++TAEKAA A+D A F LRG  AK NFP+    D++   S   +++QA+      +E + S S +
Sbjct:   31 YQIHQIQNQLNHRRSTISNLSPNRIRMKNLTPSTSKTKNLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNFPNLIHEDMNPLPSSVDTKLQAICKSLRKTEEICSVSDQ 164          
BLAST of CF504110 vs. ExPASy Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.046e-17
Identity = 49/111 (44.14%), Postives = 63/111 (56.76%), Query Frame = 1
Query:  142 EKPAEGSDSR----YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVS 462
            +K   G DS     Y+GVR R WGK+VSEIR P  ++RIWLG++ T E AARA D A   ++G +A  NFP+         SL P +IQ  A + A+ EP  S S   S S
Sbjct:   37 KKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSS 147          
BLAST of CF504110 vs. ExPASy Swiss-Prot
Match: ERF22_ARATH (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF022 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.672e-17
Identity = 43/82 (52.44%), Postives = 51/82 (62.20%), Query Frame = 1
Query:  172 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFA 417
            Y+G+R+RKWGK+VSEIR P  + RIWLGSY+TAE AA A+DAA   LRGR    NFP+         S     IQA A   A
Sbjct:   20 YRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPELVDSFPRPESSSSEHIQAAAQDAA 101          
BLAST of CF504110 vs. ExPASy Swiss-Prot
Match: ERF58_ARATH (Ethylene-responsive transcription factor ERF058 OS=Arabidopsis thaliana GN=ERF058 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.489e-17
Identity = 49/136 (36.03%), Postives = 80/136 (58.82%), Query Frame = 1
Query:   61 VNSIQHHSSKSRIPIT*SPLKMVKHAVEKPAEGSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPD--NPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVS 462
            ++S  HH S   +      +K    +  KP +     Y+GVR+R WGK+V+EIRLP +R R+WLG++DTAE+AA A+D A + LRG  A+ NFPD  +  +    +S   ++++A+    A +   + +S ++S S
Sbjct:   55 LHSFSHHLSPKPVS-----MKQTGTSAAKPTK----LYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPDLRHNDEYQPLQSSVDAKLEAICQNLAETTQKQVRSTKKSSS 181          
The following BLAST results are available for this feature:
BLAST of CF504110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
ERF62_ARATH4.122e-1843.75Ethylene-responsive transcription factor ERF062 OS... [more]
TINY_ARATH5.383e-1844.04Ethylene-responsive transcription factor TINY OS=A... [more]
ERF10_ARATH7.031e-1862.50Ethylene-responsive transcription factor ERF010 OS... [more]
ERF08_ARATH9.183e-1868.97Ethylene-responsive transcription factor ERF008 OS... [more]
ERF39_ARATH1.566e-1737.31Ethylene-responsive transcription factor ERF039 OS... [more]
ERF21_ARATH1.566e-1740.18Ethylene-responsive transcription factor ERF021 OS... [more]
ERF56_ARATH2.046e-1737.31Ethylene-responsive transcription factor ERF056 OS... [more]
DREB3_ARATH2.046e-1744.14Dehydration-responsive element-binding protein 3 O... [more]
ERF22_ARATH2.672e-1752.44Ethylene-responsive transcription factor ERF022 OS... [more]
ERF58_ARATH3.489e-1736.03Ethylene-responsive transcription factor ERF058 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-598 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504110 ID=CF504110; Name=CF504110; organism=Citrus sinensis; type=EST; length=481bp
CAAAATAAAAGCAAACAGGAATACGAGAATCATCATCCAAATCACACTCA
ATAGTTCCGAGTCAACTCGATACAGCACCACTCGTCTAAATCAAGAATAC
CCATAACCTGAAGCCCTTTAAAAATGGTGAAGCACGCAGTCGAAAAGCCT
GCTGAAGGAAGTGACTCTCGTTACAAGGGTGTCCGAAAGCGAAAGTGGGG
GAAATATGTGTCTGAAATCAGACTACCCAACAGCCGTGCCCGTATCTGGC
TGGGCTCCTACGACACAGCAGAAAAAGCAGCGCGTGCTTTCGACGCTGCT
TTGTTTTGCTTACGTGGCCGATCAGCCAAGTTTAATTTCCCGGACAACCC
ACCCGACATATCAGGCGGGCGCTCACTTAAGCCATCTGAGATTCAAGCTG
TGGCGGCTCAGTTCGCGAATTCGGAGCCGCTGAGGAGTCAATCACCAGAA
CAGTCGGTGTCCGAATTGCAAACGGAGTACT
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