CF504111
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504111 vs. ExPASy Swiss-Prot
Match: TBB_AJECA (Tubulin beta chain OS=Ajellomyces capsulata GN=TUB2 PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 9.519e-16 Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 3 Query: 27 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRG 140 MREI+H+Q GQCGNQIG+ FW+ I EHGVD G Y G Sbjct: 1 MREIVHLQTGQCGNQIGAAFWQTISGEHGVDGAGYYNG 38 HSP 2 Score: 36.1946 bits (82), Expect = 9.519e-16 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = 2 Query: 191 EASGGRYVPRAVLMDLEPGTM 253 EA+ +YVPRAVL+DLEPGTM Sbjct: 53 EAAEKKYVPRAVLVDLEPGTM 73 HSP 3 Score: 26.1794 bits (56), Expect = 9.519e-16 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 145 GVEDLQLERINVYYNRS 195 G D+QLER+NVY+N + Sbjct: 38 GSLDIQLERMNVYFNEA 54
BLAST of CF504111 vs. ExPASy Swiss-Prot
Match: TBB_CANAL (Tubulin beta chain OS=Candida albicans GN=TUB2 PE=3 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 4.653e-15 Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 3 Query: 27 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGD 143 MREI+H+ GQCGNQIG+ FWE IC EHG+D G Y G+ Sbjct: 1 MREIIHLSTGQCGNQIGAAFWETICGEHGLDNNGTYVGN 39 HSP 2 Score: 38.5058 bits (88), Expect = 4.653e-15 Identity = 16/21 (76.19%), Postives = 20/21 (95.24%), Query Frame = 2 Query: 191 EASGGRYVPRAVLMDLEPGTM 253 EA+ G+YVPRAVL+DLEPGT+ Sbjct: 53 EATSGKYVPRAVLVDLEPGTI 73
BLAST of CF504111 vs. ExPASy Swiss-Prot
Match: TBB1_TRIVI (Tubulin beta-1 chain OS=Trichoderma viride GN=tub1 PE=3 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 7.484e-15 Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 3 Query: 27 MREIL--HIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRG 140 MREI+ H+Q GQCGNQ+GS FW+ I EHG+D +G Y G Sbjct: 1 MREIVSVHLQTGQCGNQVGSAFWQTISGEHGLDSSGVYGG 40 HSP 2 Score: 38.891 bits (89), Expect = 7.484e-15 Identity = 17/21 (80.95%), Postives = 19/21 (90.48%), Query Frame = 2 Query: 191 EASGGRYVPRAVLMDLEPGTM 253 EAS +YVPRAVL+DLEPGTM Sbjct: 55 EASNNKYVPRAVLVDLEPGTM 75 HSP 3 Score: 25.7942 bits (55), Expect = 7.484e-15 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 145 GVEDLQLERINVYYNRS 195 G D QL+R+NVY+N + Sbjct: 40 GTSDQQLDRLNVYFNEA 56
BLAST of CF504111 vs. ExPASy Swiss-Prot
Match: TBB_YEAST (Tubulin beta chain OS=Saccharomyces cerevisiae GN=TUB2 PE=1 SV=2) HSP 1 Score: 63.1586 bits (152), Expect = 8.282e-14 Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 3 Query: 27 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRG 140 MREI+HI GQCGNQIG+ FWE IC EHG+D G Y G Sbjct: 1 MREIIHISTGQCGNQIGAAFWETICGEHGLDFNGTYHG 38 HSP 2 Score: 33.4982 bits (75), Expect = 8.282e-14 Identity = 13/21 (61.90%), Postives = 19/21 (90.48%), Query Frame = 2 Query: 191 EASGGRYVPRAVLMDLEPGTM 253 EAS G++VPR++ +DLEPGT+ Sbjct: 53 EASSGKWVPRSINVDLEPGTI 73
BLAST of CF504111 vs. ExPASy Swiss-Prot
Match: TBB_ASPFU (Tubulin beta chain OS=Aspergillus fumigatus GN=AFUA_7G00250 PE=3 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.269e-13 Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 3 Query: 27 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTG 128 MREI+H+Q GQCGNQ+G+ FW+ I EHG+D +G Sbjct: 1 MREIVHLQTGQCGNQVGAAFWQTISSEHGLDESG 34 HSP 2 Score: 35.8094 bits (81), Expect = 1.269e-13 Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = 2 Query: 191 EASGGRYVPRAVLMDLEPGTM 253 E +YVPRAVL+DLEPGTM Sbjct: 53 EVGNSKYVPRAVLVDLEPGTM 73 HSP 3 Score: 23.8682 bits (50), Expect = 1.269e-13 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 154 DLQLERINVYYN 189 D QLER+NVY+N Sbjct: 41 DQQLERMNVYFN 52
BLAST of CF504111 vs. ExPASy Swiss-Prot
Match: TBB1_COLGR (Tubulin beta-1 chain OS=Colletotrichum graminicola GN=TUB1 PE=3 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 3.065e-13 Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 3 Query: 27 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRG 140 MREI+H+Q GQCGNQ+G+ FW+ I EHG+D G +RG Sbjct: 1 MREIIHLQTGQCGNQVGTAFWQTIHGEHGLDQDGVFRG 38 HSP 2 Score: 35.8094 bits (81), Expect = 3.065e-13 Identity = 16/22 (72.73%), Postives = 19/22 (86.36%), Query Frame = 2 Query: 188 TEASGGRYVPRAVLMDLEPGTM 253 TEA+ +YVPRAVL+DLEP TM Sbjct: 52 TEAAKQKYVPRAVLVDLEPATM 73
BLAST of CF504111 vs. ExPASy Swiss-Prot
Match: TBB1_CHOCR (Tubulin beta-1 chain OS=Chondrus crispus GN=TUBB PE=2 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 1.909e-12 Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 3 Query: 30 REILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDR 146 R I+ +Q GQCGNQ+G KFWE I EHG+D GKY GDR Sbjct: 3 RSIVSLQVGQCGNQVGLKFWEGISAEHGIDVDGKYIGDR 41 HSP 2 Score: 33.8834 bits (76), Expect = 1.909e-12 Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 2 Query: 191 EASGGRYVPRAVLMDLEPGTM 253 E+S G YVPRA ++DLEPG + Sbjct: 55 ESSSGSYVPRAAMLDLEPGVL 75
BLAST of CF504111 vs. ExPASy Swiss-Prot
Match: TBB1_COLGL (Tubulin beta-1 chain OS=Colletotrichum gloeosporioides GN=TUB1 PE=3 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 5.427e-12 Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 3 Query: 27 MREILHIQGGQC---GNQIGSKFWEVICDEHGVDPTGKYRGD 143 MREI+H+Q GQC GNQ+G+ FW+ I EHG+D G +RG+ Sbjct: 1 MREIIHLQTGQCLIQGNQVGTAFWQTIHHEHGLDHDGYFRGE 42 HSP 2 Score: 36.5798 bits (83), Expect = 5.427e-12 Identity = 16/21 (76.19%), Postives = 18/21 (85.71%), Query Frame = 2 Query: 191 EASGGRYVPRAVLMDLEPGTM 253 EAS +YVPRAVL+DLEP TM Sbjct: 56 EASNNKYVPRAVLVDLEPATM 76
BLAST of CF504111 vs. ExPASy Swiss-Prot
Match: TBB2_OOMCK (Tubulin beta-2 chain (Fragment) OS=Oomycete-like sp. (strain MacKay2000) GN=TUBB2 PE=2 SV=1) HSP 1 Score: 44.669 bits (104), Expect = 3.593e-11 Identity = 19/21 (90.48%), Postives = 21/21 (100.00%), Query Frame = 2 Query: 191 EASGGRYVPRAVLMDLEPGTM 253 EA+GGRYVPRA+LMDLEPGTM Sbjct: 28 EATGGRYVPRAILMDLEPGTM 48 HSP 2 Score: 31.9574 bits (71), Expect = 3.593e-11 Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 102 DEHGVDPTGKYRGD 143 DEHGVDPTG Y GD Sbjct: 1 DEHGVDPTGTYHGD 14 HSP 3 Score: 30.4166 bits (67), Expect = 3.593e-11 Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 145 GVEDLQLERINVYYNRS 195 G DLQLERINVYYN + Sbjct: 13 GDSDLQLERINVYYNEA 29 The following BLAST results are available for this feature:
BLAST of CF504111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504111 ID=CF504111; Name=CF504111; organism=Citrus sinensis; type=EST; length=256bpback to top |