CF504112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: CDC54_YEAST (Cell division control protein 54 OS=Saccharomyces cerevisiae GN=CDC54 PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 5.287e-25 Identity = 54/104 (51.92%), Postives = 75/104 (72.12%), Query Frame = 1 Query: 1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312 S+AP IY ED+KK +LL L G ++ G + RGD++I L GDP +KSQ+L+++ + PRGVYT+G+GSS VGLTA + RD T ++VLE GALVL+D G+ Sbjct: 525 SIAPSIYELEDVKKGILLQLFGGTNKTFTKGGRYRGDINILLCGDPSTSKSQILQYVHKITPRGVYTSGKGSSAVGLTAYITRDVDTKQLVLESGALVLSDGGV 628
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM6_DICDI (DNA replication licensing factor mcm6 OS=Dictyostelium discoideum GN=mcm6 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.905e-25 Identity = 48/104 (46.15%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312 S+ P I+GHE+IK+ +LL+L G H+K + +++RGD+++C++GDP +KS LK++++ PR VYT+G+ SS GLTA V +D + + +E GAL+LAD GI Sbjct: 427 SICPSIFGHEEIKRGVLLMLFGGVHKKTPEKIRLRGDINVCIVGDPSTSKSTFLKYLVSFLPRTVYTSGKASSAAGLTATVVKDQESGDFNIEAGALMLADNGI 530
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM6M_XENTR (Maternal DNA replication licensing factor mcm6 OS=Xenopus tropicalis GN=mmcm6 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.905e-25 Identity = 50/104 (48.08%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312 SL P I+G+++IK+ +LL+L G + +G +RGD+++C++GDP +KSQ LKH+ +PR VYT+G+ SS GLTAAV +D ++E V+E GAL+LAD G+ Sbjct: 354 SLFPTIHGNDEIKRGVLLMLFGGVPKTTMEGTSLRGDINVCIVGDPSTSKSQFLKHVEEFSPRAVYTSGKASSAAGLTAAVVKDEESHEFVIEAGALMLADNGV 457
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM6M_XENLA (Maternal DNA replication licensing factor mcm6 OS=Xenopus laevis GN=mmcm6 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.905e-25 Identity = 50/104 (48.08%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312 SL P I+G+++IK+ +LL+L G + +G +RGD+++C++GDP +KSQ LKH+ +PR VYT+G+ SS GLTAAV +D ++E V+E GAL+LAD G+ Sbjct: 355 SLFPTIHGNDEIKRGVLLMLFGGVPKTTMEGTSLRGDINVCIVGDPSTSKSQFLKHVEEFSPRAVYTSGKASSAAGLTAAVVKDEESHEFVIEAGALMLADNGV 458
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MC6ZA_XENLA (Zygotic DNA replication licensing factor mcm6-A OS=Xenopus laevis GN=zmcm6-A PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.018e-25 Identity = 48/104 (46.15%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312 SL P ++G++++K+ +LL+L G + +G +RGD+++C++GDP AKSQ LKH+ +PR VYT+G+ S+ GLTAAV +D ++E V+E GAL+LAD G+ Sbjct: 354 SLFPTVHGNDEVKRGILLMLFGGVPKSTMEGTSLRGDINVCVVGDPSTAKSQFLKHVEEFSPRAVYTSGKASTAAGLTAAVVKDEESHEFVIEAGALMLADNGV 457
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM6_BOVIN (DNA replication licensing factor MCM6 OS=Bos taurus GN=MCM6 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.178e-24 Identity = 50/104 (48.08%), Postives = 75/104 (72.12%), Query Frame = 1 Query: 1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312 SL P I+G++++K+ +LL+L G + +G +RGD+++C++GDP AKSQ LKH+ +PR VYT+G+ S GLTAAV RD ++E V+E GAL+LAD G+ Sbjct: 353 SLFPTIHGNDEVKRGVLLMLFGGVPKTTGEGTSLRGDINVCIVGDPSTAKSQFLKHVEEFSPRAVYTSGKASIAAGLTAAVVRDEESHEFVIEAGALMLADNGV 456
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM6_CAEBR (DNA replication licensing factor mcm-6 OS=Caenorhabditis briggsae GN=mcm-6 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.624e-24 Identity = 53/105 (50.48%), Postives = 76/105 (72.38%), Query Frame = 1 Query: 1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKD-GMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312 SL P IYG+ ++K +LL+L+G +K KD G +RGD+++CL+GDP AKSQ+LK + +PR +YT+G+ SS GLTAAV +D + E V+E GAL+LAD G+ Sbjct: 353 SLFPNIYGNHEVKLGVLLMLLGGVAKKSKDEGTSLRGDINVCLVGDPSTAKSQVLKAVEEFSPRAIYTSGKASSAAGLTAAVVKDEESFEFVIEAGALMLADNGV 457
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM6_ANOGA (DNA replication licensing factor Mcm6 OS=Anopheles gambiae GN=Mcm6 PE=3 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 4.476e-24 Identity = 50/104 (48.08%), Postives = 75/104 (72.12%), Query Frame = 1 Query: 1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312 SL P IYG++++K+ +LL+L G + ++ +RGD+++C++GDP AKSQ LK + + +PR VYT+G+ SS GLTAAV RD + + V+E GAL+LAD GI Sbjct: 346 SLFPSIYGNDEVKRGILLMLFGGVAKTTQEKTTLRGDINVCIVGDPSTAKSQFLKQVSDFSPRAVYTSGKASSAAGLTAAVVRDEESFDFVIEAGALMLADNGI 449
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM6_CAEEL (DNA replication licensing factor mcm-6 OS=Caenorhabditis elegans GN=mcm-6 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.845e-24 Identity = 52/105 (49.52%), Postives = 76/105 (72.38%), Query Frame = 1 Query: 1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKD-GMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312 SL P IYG+ ++K +LL+L+G +K +D G +RGD+++CL+GDP AKSQ+LK + +PR +YT+G+ SS GLTAAV +D + E V+E GAL+LAD G+ Sbjct: 353 SLFPNIYGNHEVKLGVLLMLLGGVAKKSRDEGTSLRGDINVCLVGDPSTAKSQVLKAVEEFSPRAIYTSGKASSAAGLTAAVVKDEESFEFVIEAGALMLADNGV 457
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM4_MOUSE (DNA replication licensing factor MCM4 OS=Mus musculus GN=Mcm4 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.634e-24 Identity = 56/106 (52.83%), Postives = 74/106 (69.81%), Query Frame = 1 Query: 1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGM--KIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312 +LAP IY HEDIKK +LL L G + K R +++I L GDPG +KSQLL+++ N+ PRG YT+G+GSS VGLTA V +D T ++VL+ GALVL+D GI Sbjct: 464 ALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGI 569 The following BLAST results are available for this feature:
BLAST of CF504112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504112 ID=CF504112; Name=CF504112; organism=Citrus sinensis; type=EST; length=314bpback to top |