CF504122

Overview
NameCF504122
Unique NameCF504122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length381
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504122 vs. ExPASy Swiss-Prot
Match: GSTZ1_ARATH (Glutathione S-transferase zeta-class 1 OS=Arabidopsis thaliana GN=GST18 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.825e-12
Identity = 41/99 (41.41%), Postives = 58/99 (58.59%), Query Frame = 1
Query:   76 AKERKMKLKVYADRMSQPSRAVIIFCKVNGLDFEEIEVRLAKREQYSPEFKEINPMAKVPAIVDGRLKLFESHAILIYLACAFPGIADHWYPNDLSKRA 372
            A   + KLK+Y+   S  +  V I   + GLD+E I V L K +Q+  +FK+INPM  VPA+VDG + + +S AI++YL   +P       P DL KRA
Sbjct:    2 ANSGEEKLKLYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINPMGTVPALVDGDVVINDSFAIIMYLDEKYP--EPPLLPRDLHKRA 98          
BLAST of CF504122 vs. ExPASy Swiss-Prot
Match: GSTZ_EUPES (Glutathione S-transferase zeta class OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.914e-12
Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 1
Query:   88 KMKLKVYADRMSQPSRAVIIFCKVNGLDFEEIEVRLAKREQYSPEFKEINPMAKVPAIVDGRLKLFESHAILIYLACAFPGIADH-WYPNDLSKRA 372
            K KLK+Y+   S  S  V I   + GLD+E + V L K EQ++PEF +INP+  VPA+VDG   + +S AIL+YL   +P   +H   P D+ K+A
Sbjct:    9 KPKLKLYSYFRSSCSFRVRIALNLKGLDYEYVPVNLLKGEQFTPEFLKINPIGYVPALVDGEDVISDSFAILMYLEEKYP---EHPILPADIHKKA 101          
BLAST of CF504122 vs. ExPASy Swiss-Prot
Match: GSTT1_CHICK (Glutathione S-transferase theta-1 OS=Gallus gallus GN=GSTT1 PE=1 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 4.424e-11
Identity = 41/115 (35.65%), Postives = 60/115 (52.17%), Query Frame = 1
Query:   91 MKLKVYADRMSQPSRAVIIFCKVNGLDFEEIEVRL---------------AKREQYSPEFKE----INPMAKVPAIVDGRLKLFESHAILIYLACAFPGIADHWYPNDLSKRARI 378
            M L++Y D +SQP R++ IF + N + FE   V L               A+R +  P   E    I+ + KVP + DG   L E  AIL+YL+  +    DHWYP+D+ KRA++
Sbjct:    1 MGLELYLDLLSQPCRSIYIFARTNNIPFEFKHVELFKDSVLGKKPAAASGAERPRTGPSNSEGDGKISLLKKVPVLKDGDFTLAECTAILLYLSRKY-NTPDHWYPSDIKKRAQV 114          
BLAST of CF504122 vs. ExPASy Swiss-Prot
Match: GSTZ2_ARATH (Probable glutathione S-transferase zeta-class 2 OS=Arabidopsis thaliana GN=At2g02380 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.546e-11
Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = 1
Query:   94 KLKVYADRMSQPSRAVIIFCKVNGLDFEEIEVRLAKREQYSPEFKEINPMAKVPAIVDGRLKLFESHAILIYLACAFPGIADHWYPNDLSKRA 372
            KLK+Y+   S  +  V I   + GLD+E I V L K +Q   +FK+INPM  VPA+VDG + + +S AI++YL   +P       P+D  KRA
Sbjct:   11 KLKLYSYWRSSCAHRVRIALTLKGLDYEYIPVNLLKGDQSDSDFKKINPMGTVPALVDGDVVINDSFAIIMYLDDKYP--EPPLLPSDYHKRA 101          
The following BLAST results are available for this feature:
BLAST of CF504122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
GSTZ1_ARATH6.825e-1241.41Glutathione S-transferase zeta-class 1 OS=Arabidop... [more]
GSTZ_EUPES8.914e-1243.75Glutathione S-transferase zeta class OS=Euphorbia ... [more]
GSTT1_CHICK4.424e-1135.65Glutathione S-transferase theta-1 OS=Gallus gallus... [more]
GSTZ2_ARATH7.546e-1141.94Probable glutathione S-transferase zeta-class 2 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-610 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504122 ID=CF504122; Name=CF504122; organism=Citrus sinensis; type=EST; length=381bp
GCTGACGATTGAAACCGAGTGTCGCAAACGCTCACCAGTCACCAGCAAGC
AGAAGCAGGCACTGAGAGTGGGTGGGCTAAAGAAAGGAAAATGAAGCTGA
AAGTATATGCAGATCGGATGTCACAGCCATCTCGCGCTGTCATCATCTTT
TGCAAGGTAAATGGATTAGACTTCGAGGAGATTGAAGTTAGGTTAGCAAA
GCGTGAACAATACTCTCCTGAATTCAAAGAAATAAACCCTATGGCAAAAG
TGCCTGCTATTGTTGATGGGAGATTGAAGCTGTTTGAGAGTCATGCAATT
CTTATCTATCTTGCTTGTGCATTTCCTGGAATAGCAGATCATTGGTATCC
CAATGACCTTTCGAAGAGAGCCAGGATTCAC
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