CF504141
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS17_METVA (30S ribosomal protein S17P OS=Methanococcus vannielii GN=rps17p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.858e-16 Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 193 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 480 +IG+ K P E D CPF GT+S+RG+I G K + TI+++R ++ KY+RYEKR +++ AH PC K GD V + +CRP+S Sbjct: 3 NIGIDVKAPENVCE----DVNCPFHGTLSVRGQIFEGVVSGDKGHNTIVIKREVTGYISKYERYEKRTTSLVAHNPPCINAKTGDVVKVMECRPVS 94
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS17_METMP (30S ribosomal protein S17P OS=Methanococcus maripaludis GN=rps17p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.122e-15 Identity = 39/96 (40.62%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 193 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 480 +IG+ K P E D CPF GT+S+RG+I G S K + TI+++R ++ KY+RYEKR +++ AH C + K GD V + +CRP+S Sbjct: 3 NIGIDVKAPENVCE----DPNCPFHGTLSVRGQIFEGIVTSDKGHDTIVIKREVTGYISKYERYEKRTTSLVAHNPACIKAKVGDTVKVMECRPIS 94
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS17_PYRKO (30S ribosomal protein S17P OS=Pyrococcus kodakaraensis GN=rps17p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.466e-15 Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 1 Query: 190 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 480 + IGL + P E D KCP+ G + I GR + G S K +T++V R Y H++KKY+RYE R S + AH C K GD V+I + RP+S Sbjct: 2 REIGLRVQPPAEVCN----DPKCPWHGNLKIHGRYVEGIVVSDKGKKTVVVERQYYHYLKKYERYELRKSKVHAHNPECINAKVGDKVLIAETRPIS 94
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS17_HALWD (30S ribosomal protein S17P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps17p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.466e-15 Identity = 45/96 (46.88%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 193 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 480 +IGL P E + D CPF G++S+RG+ L GT S M++T+IV R Y V KY R KR S IPAH PC + EGD V I + RPLS Sbjct: 2 AIGLNVTEP----EVSCADTNCPFHGSLSVRGQTLEGTVASTDMDKTVIVEREYDVRVPKYDRLMKRRSRIPAHAPPCVDLAEGDTVRIAETRPLS 93
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS17_PYRFU (30S ribosomal protein S17P OS=Pyrococcus furiosus GN=rps17p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.915e-15 Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 190 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 480 + IGL + P E + D KCP+ G + I GR+ G S K +T+ V R Y ++ KY+RYE R S I AH PC K GD V+I + RPLS Sbjct: 3 RDIGLRVQPPAEKCD----DPKCPWHGNLKIHGRVFEGIVVSDKPRKTVTVERQYYFYLNKYERYELRRSKIHAHNPPCINAKVGDKVLIAETRPLS 95
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS17_PICTO (30S ribosomal protein S17P OS=Picrophilus torridus GN=rps17p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.915e-15 Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 190 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 480 ++IG+ K P E T D KCPF G + I G+I+ GT S KMN +I+++R +KKY+RYE + S AH+ C V+ GD V I +CR L+ Sbjct: 2 ENIGIDVKKP----ERTCNDPKCPFHGNLRIHGQIIVGTVVSTKMNGSIVLKRESRRLIKKYERYETKISKFHAHLPGCIDVRPGDRVKIAECRKLA 94
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS17_METJA (30S ribosomal protein S17P OS=Methanocaldococcus jannaschii GN=rps17p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.915e-15 Identity = 36/97 (37.11%), Postives = 59/97 (60.82%), Query Frame = 1 Query: 190 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 480 ++IG+ K P + DK CPF G + +RG+ G S K ++T+I++R + ++KKY+RYE+R + + AH PC + GD V + +CRP+S Sbjct: 4 RNIGIQVKAPEVECD----DKNCPFHGNLPVRGQSFVGVVVSDKPHKTVIIKREVVKYIKKYERYERRTTKLAAHNPPCIHARVGDIVRVMECRPIS 96
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS17_HALMA (30S ribosomal protein S17P OS=Haloarcula marismortui GN=rps17p PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 1.915e-15 Identity = 41/96 (42.71%), Postives = 55/96 (57.29%), Query Frame = 1 Query: 193 SIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 480 ++GL + P E T D+ CPF G +S+RG+ L G S M +T++V R Y V KY R+ KR S +PAH C + GD V I +CRPLS Sbjct: 2 ALGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKYDRFMKRRSRVPAHAPDCLDLAVGDTVTIAECRPLS 93
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS17_AERPE (30S ribosomal protein S17P OS=Aeropyrum pernix GN=rps17p PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15 Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 247 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 480 D CP+ GT+ +RG +L G A+ R ++V+ YL++ KKY RYE+R I AH+ C VKEGD V+IG+ P+S Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDCISVKEGDVVVIGETMPIS 101
BLAST of CF504141 vs. ExPASy Swiss-Prot
Match: RS17_ARCFU (30S ribosomal protein S17P OS=Archaeoglobus fulgidus GN=rps17p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.611e-14 Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = 1 Query: 190 KSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 480 + IG+ K P E D+ CPF GT+S+RG++L G +T ++ R + +V K++RY K+ S + AH C R + GD V IG+CRP+S Sbjct: 2 RDIGIDVKPPERECE----DENCPFHGTLSVRGQLLRGKVVKV-YGKTAVIERELIRYVPKFERYMKKRSKLHAHNPRCIRARPGDIVTIGECRPIS 93 The following BLAST results are available for this feature:
BLAST of CF504141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504141 ID=CF504141; Name=CF504141; organism=Citrus sinensis; type=EST; length=481bpback to top |