CF504151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504151 vs. ExPASy Swiss-Prot
Match: IMP4_ASHGO (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Ashbya gossypii GN=IMP4 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.714e-21 Identity = 57/118 (48.31%), Postives = 80/118 (67.80%), Query Frame = 2 Query: 71 MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIKEALQEGKPIPTELRNEEAALRQEIDLEDENTAIPRSHIDDEY-ANATERDPKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRG 421 MLRR R RREYLYRK+ E +E L +K+ IK+AL +GKP+P E+ ++ R D + + +A + IDDEY A + DPK+++TTSRDPS L+QF KE+K +FP + R+NRG Sbjct: 1 MLRRQARERREYLYRKAQELQESQLQQKRDLIKQALAQGKPLPKEVADDTKLQR---DYQYDESA--QESIDDEYSALSGIVDPKVIVTTSRDPSTRLSQFAKEVKLLFPTSVRLNRG 113
BLAST of CF504151 vs. ExPASy Swiss-Prot
Match: IMP4_SCHPO (U3 small nucleolar ribonucleoprotein protein imp4 OS=Schizosaccharomyces pombe GN=imp4 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.945e-19 Identity = 46/119 (38.66%), Postives = 82/119 (68.91%), Query Frame = 2 Query: 71 MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIKEALQEGKPIPTELRNEEAALRQEIDLEDENTAIPRS--HIDDEYANATERDPKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRG 421 MLRR +R RR+++Y+++ E +E L EK+R +++AL+ K + +L+ E++ L+++ ++ + ++DDEY ER+PK+L+TTSR+PS+ L QF KE++ + PN+ R+NRG Sbjct: 1 MLRRAVRERRQFIYKRNQELQEAKLNEKRRALRKALEGNKELNKDLQ-EDSQLQKDYKYDESRATQEETETNLDDEYHRLGEREPKVLVTTSREPSSRLAQFAKEVRLLIPNSYRLNRG 118 The following BLAST results are available for this feature:
BLAST of CF504151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504151 ID=CF504151; Name=CF504151; organism=Citrus sinensis; type=EST; length=423bpback to top |