CF504155

Overview
NameCF504155
Unique NameCF504155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_BURXL (Chaperone protein htpG OS=Burkholderia xenovorans (strain LB400) GN=htpG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.781e-12
Identity = 33/51 (64.71%), Postives = 44/51 (86.27%), Query Frame = 2
Query:  107 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKS 259
            ET +FQAE+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RFE++ + +
Sbjct:    4 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFEAIENSA 54          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_VIBVY (Chaperone protein htpG OS=Vibrio vulnificus (strain YJ016) GN=htpG PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.326e-12
Identity = 33/55 (60.00%), Postives = 47/55 (85.45%), Query Frame = 2
Query:   89 SMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTD 253
            ++A+  ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L++
Sbjct:    4 TVANNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFQALSN 58          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_VIBVU (Chaperone protein htpG OS=Vibrio vulnificus GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.326e-12
Identity = 33/55 (60.00%), Postives = 47/55 (85.45%), Query Frame = 2
Query:   89 SMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTD 253
            ++A+  ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L++
Sbjct:    4 TVANNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFQALSN 58          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_SHEPA (Chaperone protein htpG OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.326e-12
Identity = 32/52 (61.54%), Postives = 44/52 (84.62%), Query Frame = 2
Query:   98 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTD 253
            S+ ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+E+LT+
Sbjct:    2 SQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYEALTN 53          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_SHEHH (Chaperone protein htpG OS=Shewanella halifaxensis (strain HAW-EB4) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.326e-12
Identity = 32/52 (61.54%), Postives = 44/52 (84.62%), Query Frame = 2
Query:   98 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTD 253
            S+ ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+E+LT+
Sbjct:    2 SQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYEALTN 53          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_NITMU (Chaperone protein htpG OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.326e-12
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 2
Query:  107 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTD 253
            E   FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RFE+LTD
Sbjct:    8 EHLNFQTEVKQLLKLMIHSLYSNKEIFLRELISNASDAADKLRFEALTD 56          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_BUCAP (Chaperone protein htpG OS=Buchnera aphidicola subsp. Schizaphis graminum GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.326e-12
Identity = 31/49 (63.27%), Postives = 45/49 (91.84%), Query Frame = 2
Query:  107 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTD 253
            E ++FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RF+S+++
Sbjct:    7 EVYSFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAIDKLRFQSISN 55          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_AGGAC (Chaperone protein htpG OS=Aggregatibacter actinomycetemcomitans GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.326e-12
Identity = 33/54 (61.11%), Postives = 46/54 (85.19%), Query Frame = 2
Query:   92 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTD 253
            M++  ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L++
Sbjct:    1 MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSN 54          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_ACTPJ (Chaperone protein htpG OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.326e-12
Identity = 33/54 (61.11%), Postives = 46/54 (85.19%), Query Frame = 2
Query:   92 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTD 253
            M++  ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L++
Sbjct:    1 MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSN 54          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_ACTP7 (Chaperone protein htpG OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.326e-12
Identity = 33/54 (61.11%), Postives = 46/54 (85.19%), Query Frame = 2
Query:   92 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTD 253
            M++  ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L++
Sbjct:    1 MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSN 54          
The following BLAST results are available for this feature:
BLAST of CF504155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 286
Match NameE-valueIdentityDescription
HTPG_BURXL1.781e-1264.71Chaperone protein htpG OS=Burkholderia xenovorans ... [more]
HTPG_VIBVY2.326e-1260.00Chaperone protein htpG OS=Vibrio vulnificus (strai... [more]
HTPG_VIBVU2.326e-1260.00Chaperone protein htpG OS=Vibrio vulnificus GN=htp... [more]
HTPG_SHEPA2.326e-1261.54Chaperone protein htpG OS=Shewanella pealeana (str... [more]
HTPG_SHEHH2.326e-1261.54Chaperone protein htpG OS=Shewanella halifaxensis ... [more]
HTPG_NITMU2.326e-1269.39Chaperone protein htpG OS=Nitrosospira multiformis... [more]
HTPG_BUCAP2.326e-1263.27Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_AGGAC2.326e-1261.11Chaperone protein htpG OS=Aggregatibacter actinomy... [more]
HTPG_ACTPJ2.326e-1261.11Chaperone protein htpG OS=Actinobacillus pleuropne... [more]
HTPG_ACTP72.326e-1261.11Chaperone protein htpG OS=Actinobacillus pleuropne... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-643 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504155 ID=CF504155; Name=CF504155; organism=Citrus sinensis; type=EST; length=276bp
CTCTCTCTCTCTCTGTCTCTCGTTCGCTTCCAAAACCCCTAGTTTATAAT
TCAGAAGAGATCGTTTTTTGGTTGAACGGCAGGTCGTTTCGATGGCATCA
GAGACAGAGACGTTTGCCTTTCAGGCTGAGATCAACCAGTTGTTGAGTTT
GATCATCAACACCTTTTACAGCAACAAGGAGATCTTTCTTCGTGAGCTCA
TCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTGAAAGCTTGACA
GACAAGAGCAAGCTAGATGCCCAACC
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