CF504155

Overview
NameCF504155
Unique NameCF504155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_ACTP2 (Chaperone protein htpG OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.326e-12
Identity = 33/54 (61.11%), Postives = 46/54 (85.19%), Query Frame = 2
Query:   92 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTD 253
            M++  ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L++
Sbjct:    1 MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSN 54          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_XYLFA (Chaperone protein htpG OS=Xylella fastidiosa GN=htpG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.037e-12
Identity = 32/61 (52.46%), Postives = 49/61 (80.33%), Query Frame = 2
Query:   86 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD 268
            +++ ++ +T  FQ E+ QLL L+I++ YSNKEIFLRELISN++DA DK+RFE+L+  + L+
Sbjct:    1 MTLEADKQTHGFQTEVKQLLQLMIHSLYSNKEIFLRELISNAADAADKLRFEALSAPALLE 61          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_TREDE (Chaperone protein htpG OS=Treponema denticola GN=htpG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.037e-12
Identity = 31/49 (63.27%), Postives = 45/49 (91.84%), Query Frame = 2
Query:  113 FAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKS 259
            + F+ E+NQLLSLII++ YSNKEIFLREL+SN+SDALDK+++ +L+D++
Sbjct:    4 YKFETEVNQLLSLIIHSLYSNKEIFLRELVSNASDALDKLKYLTLSDEA 52          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_SHELP (Chaperone protein htpG OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.037e-12
Identity = 32/51 (62.75%), Postives = 43/51 (84.31%), Query Frame = 2
Query:   98 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLT 250
            S  ET  FQ E+ QLL+L+I++ YSNKEIFLREL+SN++DA DK+R+E+LT
Sbjct:    2 SHQETHGFQTEVKQLLNLMIHSLYSNKEIFLRELVSNAADAADKLRYEALT 52          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_SALTO (Chaperone protein htpG OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.037e-12
Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 2
Query:  104 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDK 256
            +ET  FQAE  QLL L++++ YSNK++FLRELISN+SDALDK+R  SL DK
Sbjct:    3 SETLEFQAEARQLLQLMVHSIYSNKDVFLRELISNASDALDKLRLASLRDK 53          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_PASMU (Chaperone protein htpG OS=Pasteurella multocida GN=htpG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.037e-12
Identity = 33/53 (62.26%), Postives = 45/53 (84.91%), Query Frame = 2
Query:   92 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLT 250
            M++  ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L+
Sbjct:    1 MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALS 53          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_HAES2 (Chaperone protein htpG OS=Haemophilus somnus (strain 2336) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.037e-12
Identity = 33/53 (62.26%), Postives = 45/53 (84.91%), Query Frame = 2
Query:   92 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLT 250
            M++  ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L+
Sbjct:    1 MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALS 53          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_HAES1 (Chaperone protein htpG OS=Haemophilus somnus (strain 129Pt) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.037e-12
Identity = 33/53 (62.26%), Postives = 45/53 (84.91%), Query Frame = 2
Query:   92 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLT 250
            M++  ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L+
Sbjct:    1 MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALS 53          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_HAEPS (Chaperone protein htpG OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.037e-12
Identity = 33/53 (62.26%), Postives = 45/53 (84.91%), Query Frame = 2
Query:   92 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLT 250
            M++  ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L+
Sbjct:    1 MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALS 53          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_HAEIN (Chaperone protein htpG OS=Haemophilus influenzae GN=htpG PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.037e-12
Identity = 33/54 (61.11%), Postives = 45/54 (83.33%), Query Frame = 2
Query:   92 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTD 253
            M+   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L++
Sbjct:    1 MSQNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSN 54          
The following BLAST results are available for this feature:
BLAST of CF504155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 286
Match NameE-valueIdentityDescription
HTPG_ACTP22.326e-1261.11Chaperone protein htpG OS=Actinobacillus pleuropne... [more]
HTPG_XYLFA3.037e-1252.46Chaperone protein htpG OS=Xylella fastidiosa GN=ht... [more]
HTPG_TREDE3.037e-1263.27Chaperone protein htpG OS=Treponema denticola GN=h... [more]
HTPG_SHELP3.037e-1262.75Chaperone protein htpG OS=Shewanella loihica (stra... [more]
HTPG_SALTO3.037e-1264.71Chaperone protein htpG OS=Salinispora tropica (str... [more]
HTPG_PASMU3.037e-1262.26Chaperone protein htpG OS=Pasteurella multocida GN... [more]
HTPG_HAES23.037e-1262.26Chaperone protein htpG OS=Haemophilus somnus (stra... [more]
HTPG_HAES13.037e-1262.26Chaperone protein htpG OS=Haemophilus somnus (stra... [more]
HTPG_HAEPS3.037e-1262.26Chaperone protein htpG OS=Haemophilus parasuis ser... [more]
HTPG_HAEIN3.037e-1261.11Chaperone protein htpG OS=Haemophilus influenzae G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-643 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504155 ID=CF504155; Name=CF504155; organism=Citrus sinensis; type=EST; length=276bp
CTCTCTCTCTCTCTGTCTCTCGTTCGCTTCCAAAACCCCTAGTTTATAAT
TCAGAAGAGATCGTTTTTTGGTTGAACGGCAGGTCGTTTCGATGGCATCA
GAGACAGAGACGTTTGCCTTTCAGGCTGAGATCAACCAGTTGTTGAGTTT
GATCATCAACACCTTTTACAGCAACAAGGAGATCTTTCTTCGTGAGCTCA
TCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTGAAAGCTTGACA
GACAAGAGCAAGCTAGATGCCCAACC
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