CF504155

Overview
NameCF504155
Unique NameCF504155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 3.579e-21
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 2
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDS 72          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.579e-21
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 2
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDS 72          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 100.138 bits (248), Expect = 3.579e-21
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 2
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDS 72          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 3.579e-21
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 2
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDS 72          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 100.138 bits (248), Expect = 3.579e-21
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 2
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDS 72          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.579e-21
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 2
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+
Sbjct:    5 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDS 61          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 3.579e-21
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 2
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDS 72          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 3.579e-21
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 2
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDS 72          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.106e-21
Identity = 52/63 (82.54%), Postives = 55/63 (87.30%), Query Frame = 2
Query:   80 QVVSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD 268
            QV     E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD
Sbjct:    4 QVQHGEDEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLD 66          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 98.9821 bits (245), Expect = 7.974e-21
Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 2
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDS 67          
The following BLAST results are available for this feature:
BLAST of CF504155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 286
Match NameE-valueIdentityDescription
HS90A_PIG3.579e-2189.47Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_PANTR3.579e-2189.47Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HS90A_MOUSE3.579e-2189.47Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HS90A_MACFA3.579e-2189.47Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN3.579e-2189.47Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_HORSE3.579e-2189.47Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]
HS90A_CRIGR3.579e-2189.47Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
HS90A_BOVIN3.579e-2189.47Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HS90B_CHICK6.106e-2182.54Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]
HS90B_RAT7.974e-2187.72Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-643 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504155 ID=CF504155; Name=CF504155; organism=Citrus sinensis; type=EST; length=276bp
CTCTCTCTCTCTCTGTCTCTCGTTCGCTTCCAAAACCCCTAGTTTATAAT
TCAGAAGAGATCGTTTTTTGGTTGAACGGCAGGTCGTTTCGATGGCATCA
GAGACAGAGACGTTTGCCTTTCAGGCTGAGATCAACCAGTTGTTGAGTTT
GATCATCAACACCTTTTACAGCAACAAGGAGATCTTTCTTCGTGAGCTCA
TCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTGAAAGCTTGACA
GACAAGAGCAAGCTAGATGCCCAACC
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