CF504155

Overview
NameCF504155
Unique NameCF504155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_FUSNN (Chaperone protein htpG OS=Fusobacterium nucleatum subsp. nucleatum GN=htpG PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.481e-11
Identity = 29/45 (64.44%), Postives = 42/45 (93.33%), Query Frame = 2
Query:  119 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTD 253
            F+AE  +LL+L+I++ Y+NKEIFLRELISN++DA+DK++F+SLTD
Sbjct:    8 FKAETKELLNLMIHSIYTNKEIFLRELISNANDAIDKLKFQSLTD 52          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_CHLCH (Chaperone protein htpG OS=Chlorobium chlorochromatii (strain CaD3) GN=htpG PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.481e-11
Identity = 31/54 (57.41%), Postives = 43/54 (79.63%), Query Frame = 2
Query:  107 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD 268
            + F ++AE+ QLL LII++ Y++ EI+LRELISN+SDAL K RF +LTD+  LD
Sbjct:   14 QEFEYKAEMKQLLDLIIHSLYTHPEIYLRELISNASDALSKARFNALTDQDMLD 67          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_ALKMQ (Chaperone protein htpG OS=Alkaliphilus metalliredigens (strain QYMF) GN=htpG PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.481e-11
Identity = 31/49 (63.27%), Postives = 43/49 (87.76%), Query Frame = 2
Query:  119 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKL 265
            F+AE  +LL L+IN+ Y++KEIFLRELISNSSDA+DKI +++LTD+S +
Sbjct:    6 FKAESKRLLDLMINSIYTHKEIFLRELISNSSDAIDKIYYKALTDESMI 54          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_WOLTR (Chaperone protein htpG OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=htpG PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.770e-11
Identity = 28/56 (50.00%), Postives = 45/56 (80.36%), Query Frame = 2
Query:  104 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            TE   F AE+ ++L+++I++ Y+NK+IFLREL+SN+SDA DK+R+ES  + + LD+
Sbjct:   12 TENLKFDAEVGKVLNIVIHSLYTNKDIFLRELVSNASDACDKLRYESQLNPNLLDS 67          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPS (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisB5) GN=htpG PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.770e-11
Identity = 30/56 (53.57%), Postives = 46/56 (82.14%), Query Frame = 2
Query:  104 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            +ET  FQAE+ +LL+L++++ YS  +IFLRELISN+SDALDK+R+ES+   + ++A
Sbjct:    8 SETKPFQAEVAELLNLMVHSVYSETDIFLRELISNASDALDKLRYESIATPALMEA 63          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBM (Chaperone protein htpG OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=htpG PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.770e-11
Identity = 32/51 (62.75%), Postives = 43/51 (84.31%), Query Frame = 2
Query:  107 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKS 259
            ET  F+AE  +LL L+IN+ Y++KEIFLRELISNSSDA+DKI +++LT+ S
Sbjct:    2 ETKQFKAESKRLLDLMINSIYTHKEIFLRELISNSSDAMDKIYYKTLTEDS 52          
The following BLAST results are available for this feature:
BLAST of CF504155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 286
Match NameE-valueIdentityDescription
HTPG_FUSNN7.481e-1164.44Chaperone protein htpG OS=Fusobacterium nucleatum ... [more]
HTPG_CHLCH7.481e-1157.41Chaperone protein htpG OS=Chlorobium chlorochromat... [more]
HTPG_ALKMQ7.481e-1163.27Chaperone protein htpG OS=Alkaliphilus metalliredi... [more]
HTPG_WOLTR9.770e-1150.00Chaperone protein htpG OS=Wolbachia sp. subsp. Bru... [more]
HTPG_RHOPS9.770e-1153.57Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_CLOBM9.770e-1162.75Chaperone protein htpG OS=Clostridium botulinum (s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-643 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504155 ID=CF504155; Name=CF504155; organism=Citrus sinensis; type=EST; length=276bp
CTCTCTCTCTCTCTGTCTCTCGTTCGCTTCCAAAACCCCTAGTTTATAAT
TCAGAAGAGATCGTTTTTTGGTTGAACGGCAGGTCGTTTCGATGGCATCA
GAGACAGAGACGTTTGCCTTTCAGGCTGAGATCAACCAGTTGTTGAGTTT
GATCATCAACACCTTTTACAGCAACAAGGAGATCTTTCTTCGTGAGCTCA
TCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTGAAAGCTTGACA
GACAAGAGCAAGCTAGATGCCCAACC
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