CF504155

Overview
NameCF504155
Unique NameCF504155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.974e-21
Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 2 
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDS 67
[Close]
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 7.974e-21
Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 2 
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDS 67
[Close]
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.974e-21
Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 2 
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDS 67
[Close]
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 98.9821 bits (245), Expect = 7.974e-21
Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 2 
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDS 67
[Close]
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 7.974e-21
Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 2 
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDS 67
[Close]
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 7.974e-21
Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 2 
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDS 67
[Close]
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 1.776e-20
Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 2 
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKL++
Sbjct:    6 EGETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLES 62
[Close]
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.320e-20
Identity = 48/57 (84.21%), Postives = 54/57 (94.74%), Query Frame = 2 
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLREL+SN+SDALDKIR+ESLTD +KLD+
Sbjct:   10 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELVSNASDALDKIRYESLTDPTKLDS 66
[Close]
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HS902_HUMAN (Putative heat shock protein HSP 90-alpha A2 OS=Homo sapiens GN=HSP90AA2 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 3.030e-20
Identity = 50/57 (87.72%), Postives = 53/57 (92.98%), Query Frame = 2 
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKI +ESLTD SKLD+
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIWYESLTDPSKLDS 72
[Close]
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.751e-20
Identity = 48/57 (84.21%), Postives = 54/57 (94.74%), Query Frame = 2 
Query:  101 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            E ETFAFQAEI QL+SLIINTFYSN+EIFL+ELISN+SDALDKIR+ESLTD SKLD+
Sbjct:   11 EVETFAFQAEIAQLISLIINTFYSNEEIFLQELISNASDALDKIRYESLTDPSKLDS 67
The following BLAST results are available for this feature:
BLAST of CF504155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 286
Match NameE-valueIdentityDescription
HS90B_PONAB7.974e-2187.72Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]
HS90B_MOUSE7.974e-2187.72Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]
HS90B_MACFA7.974e-2187.72Heat shock protein HSP 90-beta OS=Macaca fascicula... [more]
HS90B_HUMAN7.974e-2187.72Heat shock protein HSP 90-beta OS=Homo sapiens GN=... [more]
HS90B_HORSE7.974e-2187.72Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
HS90B_BOVIN7.974e-2187.72Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]
HSP83_ANOGA1.776e-2087.72Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]
HS90B_DANRE2.320e-2084.21Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
HS902_HUMAN3.030e-2087.72Putative heat shock protein HSP 90-alpha A2 OS=Hom... [more]
H90B3_HUMAN6.751e-2084.21Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-643 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504155 ID=CF504155; Name=CF504155; organism=Citrus sinensis; type=EST; length=276bp
CTCTCTCTCTCTCTGTCTCTCGTTCGCTTCCAAAACCCCTAGTTTATAAT
TCAGAAGAGATCGTTTTTTGGTTGAACGGCAGGTCGTTTCGATGGCATCA
GAGACAGAGACGTTTGCCTTTCAGGCTGAGATCAACCAGTTGTTGAGTTT
GATCATCAACACCTTTTACAGCAACAAGGAGATCTTTCTTCGTGAGCTCA
TCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTGAAAGCTTGACA
GACAAGAGCAAGCTAGATGCCCAACC
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