CF504155

Overview
NameCF504155
Unique NameCF504155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.172e-18
Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = 2
Query:   98 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 274
            S TETF F+AEI+QL+SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D   LDA+
Sbjct:    2 SNTETFKFEAEISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPHALDAE 60          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HSP90_ASPFU (Heat shock protein 90 OS=Aspergillus fumigatus GN=hsp90 PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 2.836e-18
Identity = 45/55 (81.82%), Postives = 52/55 (94.55%), Query Frame = 2
Query:  104 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD 268
            +ETF FQAEI+QLLSLIINT YSNKEIFLRELISN+SDALDKIR++SL+D +KLD
Sbjct:    3 SETFEFQAEISQLLSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPTKLD 57          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.838e-18
Identity = 44/54 (81.48%), Postives = 52/54 (96.30%), Query Frame = 2
Query:  107 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD 268
            ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+++LT+ ++L+
Sbjct:    8 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYQALTEPAELE 61          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.838e-17
Identity = 44/56 (78.57%), Postives = 52/56 (92.86%), Query Frame = 2
Query:  104 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            +ETF FQAEI+QLLSLIINT YSNKEIFLRELISN SDALDKIR+++L+D SKL++
Sbjct:    3 SETFEFQAEISQLLSLIINTVYSNKEIFLRELISNFSDALDKIRYKALSDPSKLES 58          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.136e-17
Identity = 42/53 (79.25%), Postives = 49/53 (92.45%), Query Frame = 2
Query:  107 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKL 265
            ETFAF A+I QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+E++T+  KL
Sbjct:    5 ETFAFNADIQQLMSLIINTFYSNKEIFLRELISNASDALDKIRYEAITEPEKL 57          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.349e-17
Identity = 42/57 (73.68%), Postives = 51/57 (89.47%), Query Frame = 2
Query:  104 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 274
            +ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D  +L+ +
Sbjct:    3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETE 59          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 85.1149 bits (209), Expect = 1.192e-16
Identity = 41/56 (73.21%), Postives = 50/56 (89.29%), Query Frame = 2
Query:  107 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 274
            ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR+++L+D  +L+ +
Sbjct:    4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPKQLETE 59          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.556e-16
Identity = 42/58 (72.41%), Postives = 50/58 (86.21%), Query Frame = 2
Query:   98 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 271
            S  ET+ FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D   L++
Sbjct:    2 SSQETYEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPKVLES 59          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.528e-16
Identity = 40/59 (67.80%), Postives = 53/59 (89.83%), Query Frame = 2
Query:   98 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 274
            ++ ET  F AEI+QL+SLIINT YSNKEIFLRELISN+SDALDKIR+++L+D S+L+++
Sbjct:    4 AKVETHEFTAEISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPSQLESE 62          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_MYXXD (Chaperone protein htpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.009e-15
Identity = 40/60 (66.67%), Postives = 50/60 (83.33%), Query Frame = 2
Query:   86 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKL 265
            V  A + ET AFQAEINQLLSL+IN+ YS+KEIFLREL+SN+SDALDK+RF ++T+   L
Sbjct:    3 VENAPQRETHAFQAEINQLLSLVINSLYSHKEIFLRELVSNASDALDKLRFRAITEPELL 62          
The following BLAST results are available for this feature:
BLAST of CF504155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 286
Match NameE-valueIdentityDescription
HSP90_SCHPO2.172e-1876.27Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
HSP90_ASPFU2.836e-1881.82Heat shock protein 90 OS=Aspergillus fumigatus GN=... [more]
HSP90_BRUPA4.838e-1881.48Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HSP82_AJECA1.838e-1778.57Heat shock protein 82 OS=Ajellomyces capsulata GN=... [more]
HSP90_EIMTE3.136e-1779.25Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ... [more]
HSP82_YEAST5.349e-1773.68ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSC82_YEAST1.192e-1673.21ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP82_ASHGO1.556e-1672.41Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
HSP90_CANAL4.528e-1667.80Heat shock protein 90 homolog OS=Candida albicans ... [more]
HTPG_MYXXD1.009e-1566.67Chaperone protein htpG OS=Myxococcus xanthus (stra... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-643 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504155 ID=CF504155; Name=CF504155; organism=Citrus sinensis; type=EST; length=276bp
CTCTCTCTCTCTCTGTCTCTCGTTCGCTTCCAAAACCCCTAGTTTATAAT
TCAGAAGAGATCGTTTTTTGGTTGAACGGCAGGTCGTTTCGATGGCATCA
GAGACAGAGACGTTTGCCTTTCAGGCTGAGATCAACCAGTTGTTGAGTTT
GATCATCAACACCTTTTACAGCAACAAGGAGATCTTTCTTCGTGAGCTCA
TCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTGAAAGCTTGACA
GACAAGAGCAAGCTAGATGCCCAACC
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