CF504155

Overview
NameCF504155
Unique NameCF504155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_PSE14 (Chaperone protein htpG OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=htpG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.103e-13
Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 2
Query:   86 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD 268
            +S+ ++ ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RFE+L+    L+
Sbjct:    1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALSKPELLE 61          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_MAGSM (Chaperone protein htpG OS=Magnetococcus sp. (strain MC-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.103e-13
Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 2
Query:   86 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKS 259
            +S A+ETE   FQ E++QLL L+I+  YSNKEIFLRELISN+SDA DK+RF  L+D S
Sbjct:    1 MSAATETEVREFQTEVSQLLDLMIHALYSNKEIFLRELISNASDANDKLRFAGLSDDS 58          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_PSESM (Chaperone protein htpG OS=Pseudomonas syringae pv. tomato GN=htpG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.747e-13
Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 2
Query:   86 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD 268
            +S+ ++ ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RFE+L+    L+
Sbjct:    1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALSRPELLE 61          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_PSEPF (Chaperone protein htpG OS=Pseudomonas fluorescens (strain Pf0-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.747e-13
Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 2
Query:   86 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD 268
            +S+ ++ ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RFE+L     L+
Sbjct:    1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALAKPELLE 61          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_PSEAE (Chaperone protein htpG OS=Pseudomonas aeruginosa GN=htpG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.747e-13
Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 2
Query:   86 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD 268
            +S+ ++ ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RFE+L +   L+
Sbjct:    1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFEALANPELLE 61          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_PSEA7 (Chaperone protein htpG OS=Pseudomonas aeruginosa (strain PA7) GN=htpG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.747e-13
Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 2
Query:   86 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD 268
            +S+ ++ ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RFE+L +   L+
Sbjct:    1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFEALANPELLE 61          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_METFK (Chaperone protein htpG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=htpG1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.747e-13
Identity = 38/59 (64.41%), Postives = 47/59 (79.66%), Query Frame = 2
Query:   92 MASET---ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKS 259
            M++ET   ET  FQAE+ QLL L+I++ YSNKEI LRELISN+SDA DK+RFE+L D S
Sbjct:    1 MSTETLQKETLGFQAEVKQLLQLMIHSLYSNKEIVLRELISNASDAADKLRFEALADNS 59          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_COXBN (Chaperone protein htpG OS=Coxiella burnetii (strain Dugway 5J108-111) GN=htpG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.747e-13
Identity = 33/56 (58.93%), Postives = 48/56 (85.71%), Query Frame = 2
Query:   86 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTD 253
            +S+  ++ET +F+AE+ QLL L+ ++ YSNKEIFLRELISNSSDA DK+R+++L+D
Sbjct:    1 MSLQPQSETLSFEAEVKQLLHLVAHSLYSNKEIFLRELISNSSDAADKLRYQALSD 56          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_BORPA (Chaperone protein htpG OS=Bordetella parapertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.747e-13
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 2
Query:   98 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD 268
            S +ET  FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE++     LD
Sbjct:    8 SASETLGFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDACDKLRFEAIDQPGLLD 64          
BLAST of CF504155 vs. ExPASy Swiss-Prot
Match: HTPG_BORBR (Chaperone protein htpG OS=Bordetella bronchiseptica GN=htpG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.747e-13
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 2
Query:   98 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD 268
            S +ET  FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE++     LD
Sbjct:    8 SASETLGFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDACDKLRFEAIDQPGLLD 64          
The following BLAST results are available for this feature:
BLAST of CF504155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 286
Match NameE-valueIdentityDescription
HTPG_PSE142.103e-1357.38Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_MAGSM2.103e-1363.79Chaperone protein htpG OS=Magnetococcus sp. (strai... [more]
HTPG_PSESM2.747e-1357.38Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_PSEPF2.747e-1357.38Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_PSEAE2.747e-1357.38Chaperone protein htpG OS=Pseudomonas aeruginosa G... [more]
HTPG_PSEA72.747e-1357.38Chaperone protein htpG OS=Pseudomonas aeruginosa (... [more]
HTPG_METFK2.747e-1364.41Chaperone protein htpG OS=Methylobacillus flagella... [more]
HTPG_COXBN2.747e-1358.93Chaperone protein htpG OS=Coxiella burnetii (strai... [more]
HTPG_BORPA2.747e-1361.40Chaperone protein htpG OS=Bordetella parapertussis... [more]
HTPG_BORBR2.747e-1361.40Chaperone protein htpG OS=Bordetella bronchiseptic... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-643 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504155 ID=CF504155; Name=CF504155; organism=Citrus sinensis; type=EST; length=276bp
CTCTCTCTCTCTCTGTCTCTCGTTCGCTTCCAAAACCCCTAGTTTATAAT
TCAGAAGAGATCGTTTTTTGGTTGAACGGCAGGTCGTTTCGATGGCATCA
GAGACAGAGACGTTTGCCTTTCAGGCTGAGATCAACCAGTTGTTGAGTTT
GATCATCAACACCTTTTACAGCAACAAGGAGATCTTTCTTCGTGAGCTCA
TCAGCAACTCCTCCGATGCATTGGATAAGATCAGATTTGAAAGCTTGACA
GACAAGAGCAAGCTAGATGCCCAACC
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