CF504166
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504166 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.118e-15 Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = -3 Query: 245 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 466 F+E+ K++ +G+ LE+ P FLK GDA +VK+IPTKPMV+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 354 FAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CF504166 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.118e-15 Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = -3 Query: 245 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 466 F+E+ K++ +G+ LE+ P FLK GDA +VK+IPTKPMV+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 354 FAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CF504166 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.118e-15 Identity = 39/73 (53.42%), Postives = 52/73 (71.23%), Query Frame = -3 Query: 248 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 466 F+EL K+D RSG+ E+ P FLK GDA + + PT+P+V+ET + P LGRFAVRDM TVA G++ SV+ K Sbjct: 350 FTELNKKLDPRSGQVKEENPAFLKAGDAAICTITPTRPLVIETAKELPQLGRFAVRDMGMTVAAGLVLSVKAK 422
BLAST of CF504166 vs. ExPASy Swiss-Prot
Match: EF1A_METB6 (Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8) GN=tuf PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.379e-15 Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = -3 Query: 248 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 466 F EL K+D RSG+ E+ P FLK GDA +V++ PTKPMV+E + P LGRFAVRDM T+A G+ +++ K Sbjct: 350 FIELKKKLDPRSGQTKEENPTFLKTGDAAIVQIKPTKPMVIENVKELPQLGRFAVRDMGSTIAAGMCIAIQPK 422
BLAST of CF504166 vs. ExPASy Swiss-Prot
Match: EF1A_IGNH4 (Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.379e-15 Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = -3 Query: 254 ELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 460 E+ KID R+GK +E+ P FLK GDA +V P KPMV+E F ++ PLGRFA+RDM +TV +G++ V+ Sbjct: 364 EIKQKIDPRTGKVIEENPSFLKPGDAAVVVFKPLKPMVIEKFQEFQPLGRFAMRDMGKTVGIGIVTDVK 432
BLAST of CF504166 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.025e-15 Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = -3 Query: 248 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 466 F EL+ K+D R+G+ E+ P FLK GDA +VK+ PT+PMV+E + P LGRFAVRDM T+A GV + K Sbjct: 350 FVELMKKLDPRTGQVKEENPTFLKTGDAAIVKIRPTQPMVIEKVKEIPQLGRFAVRDMGSTIAAGVCMDITPK 422
BLAST of CF504166 vs. ExPASy Swiss-Prot
Match: EF1A_AERPE (Elongation factor 1-alpha OS=Aeropyrum pernix GN=tuf PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.198e-14 Identity = 34/69 (49.28%), Postives = 52/69 (75.36%), Query Frame = -3 Query: 254 ELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 460 E+ K+D ++G+ +E+ P+FLK GDA +V+ P KP+VVE FS+ P LGRFA+RDM +TV +G++ V+ Sbjct: 360 EIKAKLDPKTGQVVEQNPQFLKAGDAAIVRFKPVKPLVVEKFSEIPQLGRFAMRDMNRTVGIGIVTDVK 428
BLAST of CF504166 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.565e-14 Identity = 36/74 (48.65%), Postives = 52/74 (70.27%), Query Frame = -3 Query: 248 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 469 + E+V ++ + G L+++P F+KNGD +VK+IP KP+V+E S+ P LGRFAVRDM QTVA G +EK+ Sbjct: 351 RIDEIVKTLNPKDGTTLKEKPDFIKNGDVAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424
BLAST of CF504166 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAB (Elongation factor 1-alpha OS=Pyrococcus abyssi GN=tuf PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.044e-14 Identity = 34/74 (45.95%), Postives = 53/74 (71.62%), Query Frame = -3 Query: 251 VKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 472 V+F +L+ KID R+G E+ P+F+K GD+ +V + P KP+V+E + P LGRFA+RDM T+A G++ S++K Sbjct: 353 VRFEQLLAKIDPRTGNITEENPQFIKTGDSAIVVLRPMKPVVLEPVKELPQLGRFAIRDMGMTIAAGMVISIQK 426
BLAST of CF504166 vs. ExPASy Swiss-Prot
Match: EF1A_METM7 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=tuf PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.044e-14 Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = -3 Query: 245 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 466 F EL K++ +G+ LE+ P FLK GDA +VK++PTKP+V+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 354 FMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427 The following BLAST results are available for this feature:
BLAST of CF504166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 154
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504166 ID=CF504166; Name=CF504166; organism=Citrus sinensis; type=EST; length=474bpback to top |