CF504169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 50/90 (55.56%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 128 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 T E+DYLFK++LIGDSGVGKS LL FT + F E TIGV+F + + + GK +K IWDTAGQER++ +TS+YYRGA G ++ YD Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYD 92
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 50/90 (55.56%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 128 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 T E+DYLFK++LIGDSGVGKS LL FT + F E TIGV+F + + + GK +K IWDTAGQER++ +TS+YYRGA G ++ YD Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYD 92
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 50/90 (55.56%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 128 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 T E+DYLFK++LIGDSGVGKS LL FT + F E TIGV+F + + + GK +K IWDTAGQER++ +TS+YYRGA G ++ YD Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYD 92
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 50/90 (55.56%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 128 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 T E+DYLFK++LIGDSGVGKS LL FT + F E TIGV+F + + + GK +K IWDTAGQER++ +TS+YYRGA G ++ YD Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYD 92
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 50/90 (55.56%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 128 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 T E+DYLFK++LIGDSGVGKS LL FT + F E TIGV+F + + + GK +K IWDTAGQER++ +TS+YYRGA G ++ YD Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYD 92
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 50/90 (55.56%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 128 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 T E+DYLFK++LIGDSGVGKS LL FT + F E TIGV+F + + + GK +K IWDTAGQER++ +TS+YYRGA G ++ YD Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYD 92
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB18_DICDI (Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 52/86 (60.47%), Postives = 67/86 (77.91%), Query Frame = 2 Query: 140 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 E D +K+LLIGDS VGK++++ F+ DTF+E L TIGV+FK+K V + GKK+ L IWDTAGQE+F+ L SSYYRGA GII+ YD Sbjct: 2 EEDKQYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWDTAGQEKFRALISSYYRGAHGIILTYD 87
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: YPT32_YEAST (GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae GN=YPT32 PE=1 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 2.462e-22 Identity = 50/94 (53.19%), Postives = 68/94 (72.34%), Query Frame = 2 Query: 116 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 M++ ++DYLFK++LIGDSGVGKS LL FT+D F E TIGV+F + + + KK+K IWDTAGQER++ +TS+YYRGA G ++ YD Sbjct: 1 MSNEDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYD 94
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.215e-22 Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 131 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 + Q FDY+FKLL+IG+S VGK++ L + D+F T+G+DFK+K V K++KL IWDTAGQER++T+T++YYRGA G I+ YD Sbjct: 14 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 102
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 3.215e-22 Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 131 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 + Q FDY+FKLLLIG+S VGK++ L + D+F T+G+DFK+K V K++KL IWDTAGQER++T+T++YYRGA G ++ YD Sbjct: 15 ADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYD 103 The following BLAST results are available for this feature:
BLAST of CF504169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 370
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504169 ID=CF504169; Name=CF504169; organism=Citrus sinensis; type=EST; length=394bpback to top |