CF504169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.596e-21 Identity = 48/89 (53.93%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 131 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 S +++D+LFK++LIG++GVGK+ L+ FT F TIGVDF IK V + G+K+KL IWDTAGQERF+++T SYYR A +I+ YD Sbjct: 2 SMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYD 90
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 1.596e-21 Identity = 48/89 (53.93%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 131 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 S +++D+LFK++LIG++GVGK+ L+ FT F TIGVDF IK V + G+K+KL IWDTAGQERF+++T SYYR A +I+ YD Sbjct: 2 SMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYD 90
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.596e-21 Identity = 48/89 (53.93%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 131 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 S +++D+LFK++LIG++GVGK+ L+ FT F TIGVDF IK V + G+K+KL IWDTAGQERF+++T SYYR A +I+ YD Sbjct: 2 SMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYD 90
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB19_XENLA (Ras-related protein Rab-19 OS=Xenopus laevis GN=rab19 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.596e-21 Identity = 47/91 (51.65%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 125 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 S FD+LFK++LIGDS VGK+ ++ F S F + TIGVDF ++ + + GKK+K+ +WDTAGQERF+T+T SYYR A G I+ YD Sbjct: 6 SLEDDPFDFLFKIILIGDSNVGKTCVVHRFQSGIFMDNQQNTIGVDFTVRSLNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYD 96
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 101.293 bits (251), Expect = 1.596e-21 Identity = 49/87 (56.32%), Postives = 64/87 (73.56%), Query Frame = 2 Query: 137 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 QE+DYLFK++LIGDSGVGKS +L FT + F E TIGV+F + + GK +K IWDTAGQER++ +TS+YYRGA G ++ YD Sbjct: 7 QEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYD 93
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB19_RAT (Ras-related protein Rab-19 OS=Rattus norvegicus GN=Rab19 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.084e-21 Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 119 ASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 A+ T + DYLFK++LIGDS VGK+ ++ F S + E TIGVDF ++ + + GKK+K+ +WDTAGQERF+T+T SYYR A I+ YD Sbjct: 6 AARTVDENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYD 98
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.722e-21 Identity = 46/87 (52.87%), Postives = 65/87 (74.71%), Query Frame = 2 Query: 137 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 +++D+LFKL+L+GD+ VGK+ ++ F + F E TIGVDF +K + + GK++KL IWDTAGQERF+T+T SYYR A G I+ YD Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYD 99
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB2_LYMST (Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.555e-21 Identity = 47/85 (55.29%), Postives = 64/85 (75.29%), Query Frame = 2 Query: 143 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 + YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + +T+ GK++KL IWDTAGQE F+++T SYYRGA G ++ YD Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYD 87
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB2A_RABIT (Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.555e-21 Identity = 47/85 (55.29%), Postives = 64/85 (75.29%), Query Frame = 2 Query: 143 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 + YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + +T+ GK++KL IWDTAGQE F+++T SYYRGA G ++ YD Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYD 87
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB2A_PONAB (Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.555e-21 Identity = 47/85 (55.29%), Postives = 64/85 (75.29%), Query Frame = 2 Query: 143 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 + YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + +T+ GK++KL IWDTAGQE F+++T SYYRGA G ++ YD Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYD 87 The following BLAST results are available for this feature:
BLAST of CF504169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 370
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504169 ID=CF504169; Name=CF504169; organism=Citrus sinensis; type=EST; length=394bpback to top |