CF504169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 1.490e-27 Identity = 61/86 (70.93%), Postives = 71/86 (82.56%), Query Frame = 2 Query: 140 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWDTAGQERF+T+TSSYYRG+ GII+ YD Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYD 89
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 1.946e-27 Identity = 61/86 (70.93%), Postives = 70/86 (81.40%), Query Frame = 2 Query: 140 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 E+DYLFKLLLIGDSGVGKS LLL F+ D++ E TIGVDFKI+ V GK +KL IWDTAGQERF+T+TSSYYRGA GII+ YD Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYD 89
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 1.946e-27 Identity = 60/86 (69.77%), Postives = 69/86 (80.23%), Query Frame = 2 Query: 140 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 ++ YLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTAGQERF+T+TSSYYRGA GII+ YD Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYD 89
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 2.542e-27 Identity = 61/86 (70.93%), Postives = 69/86 (80.23%), Query Frame = 2 Query: 140 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWDTAGQERF+T+TSSYYRGA GII+ YD Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYD 89
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.542e-27 Identity = 61/86 (70.93%), Postives = 69/86 (80.23%), Query Frame = 2 Query: 140 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTAGQER +T+TSSYYRGA GII+ YD Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYD 89
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.662e-27 Identity = 60/86 (69.77%), Postives = 69/86 (80.23%), Query Frame = 2 Query: 140 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWDTAGQERF+T+TSSYYRGA GII+ YD Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYD 89
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RB18A_LYMST (Ras-related protein Rab-18A OS=Lymnaea stagnalis GN=RAB18A PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.662e-27 Identity = 59/88 (67.05%), Postives = 72/88 (81.82%), Query Frame = 2 Query: 134 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 +QE K+L+IG+SGVGKS+LLL FT DTF+ E + TIGVDFK+K +T+ G K KLAIWDTAGQERF+TLT SYYRGAQG+I+ YD Sbjct: 3 EQEIITTLKILIIGESGVGKSSLLLRFTEDTFDPEQAATIGVDFKVKTLTVEGNKTKLAIWDTAGQERFRTLTPSYYRGAQGVILVYD 90
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB18_RAT (Ras-related protein Rab-18 OS=Rattus norvegicus GN=Rab18 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.395e-27 Identity = 57/80 (71.25%), Postives = 70/80 (87.50%), Query Frame = 2 Query: 158 KLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQERF+TLT SYYRGAQG+I+ YD Sbjct: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYD 89
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB18_PONAB (Ras-related protein Rab-18 OS=Pongo abelii GN=RAB18 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.395e-27 Identity = 57/80 (71.25%), Postives = 70/80 (87.50%), Query Frame = 2 Query: 158 KLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQERF+TLT SYYRGAQG+I+ YD Sbjct: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYD 89
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB18_MOUSE (Ras-related protein Rab-18 OS=Mus musculus GN=Rab18 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 7.395e-27 Identity = 57/80 (71.25%), Postives = 70/80 (87.50%), Query Frame = 2 Query: 158 KLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQERF+TLT SYYRGAQG+I+ YD Sbjct: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYD 89 The following BLAST results are available for this feature:
BLAST of CF504169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 370
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504169 ID=CF504169; Name=CF504169; organism=Citrus sinensis; type=EST; length=394bpback to top |