CF504169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.395e-25 Identity = 54/85 (63.53%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 143 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 +D+LFKLLLIGDSGVGK+ L++ F D F TIG+DFKI+ V + GKK+KL +WDTAGQERFKT+T++YYRGA GII+ YD Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYD 89
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.821e-25 Identity = 54/89 (60.67%), Postives = 71/89 (79.78%), Query Frame = 2 Query: 131 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 ++ ++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWDTAGQERF+T+T++YYRGA GI++ YD Sbjct: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYD 96
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.821e-25 Identity = 54/89 (60.67%), Postives = 71/89 (79.78%), Query Frame = 2 Query: 131 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 ++ ++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWDTAGQERF+T+T++YYRGA GI++ YD Sbjct: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYD 96
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 2.379e-25 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 143 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 +DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GK++KL IWDTAGQERF+T+T++YYRGA GI++ YD Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.379e-25 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 143 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 +DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GK++KL IWDTAGQERF+T+T++YYRGA GI++ YD Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 2.379e-25 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 143 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 +DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GK++KL IWDTAGQERF+T+T++YYRGA GI++ YD Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.379e-25 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 143 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 +DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GK++KL IWDTAGQERF+T+T++YYRGA GI++ YD Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.379e-25 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 143 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 +DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GK++KL IWDTAGQERF+T+T++YYRGA GI++ YD Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.379e-25 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 143 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 +DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GK++KL IWDTAGQERF+T+T++YYRGA GI++ YD Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.379e-25 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 143 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 +DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GK++KL IWDTAGQERF+T+T++YYRGA GI++ YD Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYD 89 The following BLAST results are available for this feature:
BLAST of CF504169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 370
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504169 ID=CF504169; Name=CF504169; organism=Citrus sinensis; type=EST; length=394bpback to top |