CF504169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.478e-23 Identity = 53/94 (56.38%), Postives = 67/94 (71.28%), Query Frame = 2 Query: 116 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 MA + +E+DYLFKL+LIGDSGVGKS LL FT + F E TIGV+F K + GK +K IWDTAGQER++ +TS+YYRGA G ++ YD Sbjct: 1 MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYD 94
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.461e-23 Identity = 52/94 (55.32%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 116 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 MA + E+DYLFKL+LIGDSGVGKS LL FT + F E TIGV+F K + + K +K IWDTAGQER++ +TS+YYRGA G ++ YD Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYD 94
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB3B_RAT (Ras-related protein Rab-3B OS=Rattus norvegicus GN=Rab3b PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 8.461e-23 Identity = 49/89 (55.06%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 131 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 S Q FDY+FKLL+IG+S VGK++ L + DTF T+G+DFK+K V K++KL IWDTAGQER++T+T++YYRGA G I+ YD Sbjct: 15 SDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 103
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.461e-23 Identity = 49/89 (55.06%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 131 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 S Q FDY+FKLL+IG+S VGK++ L + DTF T+G+DFK+K V K++KL IWDTAGQER++T+T++YYRGA G I+ YD Sbjct: 15 SDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 103
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.461e-23 Identity = 49/89 (55.06%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 131 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 S Q FDY+FKLL+IG+S VGK++ L + DTF T+G+DFK+K V K++KL IWDTAGQER++T+T++YYRGA G I+ YD Sbjct: 15 SDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 103
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB3B_HUMAN (Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3B PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 8.461e-23 Identity = 49/89 (55.06%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 131 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 S Q FDY+FKLL+IG+S VGK++ L + DTF T+G+DFK+K V K++KL IWDTAGQER++T+T++YYRGA G I+ YD Sbjct: 15 SDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 103
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.461e-23 Identity = 49/89 (55.06%), Postives = 66/89 (74.16%), Query Frame = 2 Query: 131 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 S Q FDY+FKLL+IG+S VGK++ L + DTF T+G+DFK+K V K++KL IWDTAGQER++T+T++YYRGA G I+ YD Sbjct: 15 SDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 103
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB3A_RAT (Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 46/90 (51.11%), Postives = 67/90 (74.44%), Query Frame = 2 Query: 128 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 +S Q FDY+FK+L+IG+S VGK++ L + D+F T+G+DFK+K + K++KL IWDTAGQER++T+T++YYRGA G I+ YD Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 103
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB3A_PIG (Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 46/90 (51.11%), Postives = 67/90 (74.44%), Query Frame = 2 Query: 128 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 +S Q FDY+FK+L+IG+S VGK++ L + D+F T+G+DFK+K + K++KL IWDTAGQER++T+T++YYRGA G I+ YD Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 103
BLAST of CF504169 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.443e-22 Identity = 46/90 (51.11%), Postives = 67/90 (74.44%), Query Frame = 2 Query: 128 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVTLGGKKLKLAIWDTAGQERFKTLTSSYYRGAQGIIMGYD 394 +S Q FDY+FK+L+IG+S VGK++ L + D+F T+G+DFK+K + K++KL IWDTAGQER++T+T++YYRGA G I+ YD Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYD 103 The following BLAST results are available for this feature:
BLAST of CF504169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 370
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504169 ID=CF504169; Name=CF504169; organism=Citrus sinensis; type=EST; length=394bpback to top |