CF504176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504176 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 2.621e-12 Identity = 41/109 (37.61%), Postives = 64/109 (58.72%), Query Frame = 3 Query: 90 AKVFAQQGAKVVIADIQEQLGHSVVESIGT--SNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVM 410 A +FA++GAKV I DI E+ G VE I + ++++ DV ++ + + +TV T G+LDI+ NNAGI I + + DF++ ++VNV G FL K+A M Sbjct: 22 AVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIFGDVAKDA--EQIVKKTVETFGRLDILVNNAGI--VPYGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQM 126 HSP 2 Score: 24.6386 bits (52), Expect = 2.621e-12 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 2 Query: 35 EGKVAFITGGASGIG 79 +GKV ITG SGIG Sbjct: 4 QGKVVLITGAGSGIG 18
BLAST of CF504176 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 1.257e-11 Identity = 33/102 (32.35%), Postives = 59/102 (57.84%), Query Frame = 3 Query: 84 APAKVFAQQGAKVVIADIQEQLGHSVV---ESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVF 380 A +FAQ+GA V+ DI ++ S+V E + YV +VT+ IK +++ V +G++D++ NNAGI ++ ++ D++ V++VN+ GVF Sbjct: 20 ATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPGKVDPYV-LNVTDRDQIKEVVEKVVQKYGRIDVLVNNAGI--TRDALLVRMKEEDWDAVINVNLKGVF 118 HSP 2 Score: 32.3426 bits (72), Expect = 1.257e-11 Identity = 15/20 (75.00%), Postives = 15/20 (75.00%), Query Frame = 2 Query: 29 RLEGKVAFITGGASGIGACT 88 RLEGKV ITG ASGIG T Sbjct: 2 RLEGKVCLITGAASGIGKAT 21
BLAST of CF504176 vs. ExPASy Swiss-Prot
Match: HCD2_RAT (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus GN=Hsd17b10 PE=1 SV=3) HSP 1 Score: 52.7582 bits (125), Expect = 2.116e-11 Identity = 35/111 (31.53%), Postives = 55/111 (49.55%), Query Frame = 3 Query: 90 AKVFAQQGAKVVIADIQEQLGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKA----DFERVLSVNVTGVFLGIKHAARVM 410 AK QGA V+ D+ G + + +G N + +VT+E ++ A+ G++D+ N AGI A KT + DF+RV++VN+ G F I+ A VM Sbjct: 27 AKRLVGQGATAVLLDVPNSEGETEAKKLG-GNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVM 136 HSP 2 Score: 35.039 bits (79), Expect = 2.116e-11 Identity = 17/34 (50.00%), Postives = 22/34 (64.71%), Query Frame = 2 Query: 11 LSAITRRLEGKVAFITGGASGIGACTCKSLCPTG 112 ++A R ++G VA ITGGASG+G T K L G Sbjct: 1 MAAAVRSVKGLVAVITGGASGLGLSTAKRLVGQG 34
BLAST of CF504176 vs. ExPASy Swiss-Prot
Match: Y019_THEMA (Uncharacterized oxidoreductase TM_0019 OS=Thermotoga maritima GN=TM_0019 PE=3 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 3.366e-11 Identity = 38/112 (33.93%), Postives = 66/112 (58.93%), Query Frame = 3 Query: 84 APAKVFAQQGAKVVIADIQEQLGHSVVESIGTS--NSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMI 413 A A++FA+ G KVVIA+I E+ G E + + ++V DV +E+ +KN + +TV +G +D++ NNA + I + ++ERV+ VN+TG ++ ++ A MI Sbjct: 19 AIAQLFAENGMKVVIAEIDEEAGVEREEMLRERGLDVTFVKTDVADENSVKNMVRKTVEIYGGVDVLVNNAAVMSVKS--IFERPLEEWERVIRVNLTGPYICSRYCAEEMI 128
BLAST of CF504176 vs. ExPASy Swiss-Prot
Match: LINC_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linC PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.498e-11 Identity = 38/110 (34.55%), Postives = 58/110 (52.73%), Query Frame = 3 Query: 84 APAKVFAQQGAKVVIADIQEQLGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMI 413 A ++ GA V +ADI ++ G +VV + G ++Y CD+ E +K + QT+A G LD FNNA I A + + F + + +NVTG FL +K+ MI Sbjct: 21 ATVELLVASGANVPVADINDEAGEAVVATSG-GKAAYFRCDIAQEEDVKALVAQTLAAFGGLDGSFNNAAIPQAG-LPLAEVSLERFRQSMDINVTGTFLCMKYQILAMI 128
BLAST of CF504176 vs. ExPASy Swiss-Prot
Match: 3BHD_COMTE (3-beta-hydroxysteroid dehydrogenase OS=Comamonas testosteroni PE=1 SV=5) HSP 1 Score: 49.2914 bits (116), Expect = 7.806e-11 Identity = 33/109 (30.28%), Postives = 51/109 (46.79%), Query Frame = 3 Query: 93 KVFAQQGAKVVIADIQEQLGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGI---GGANKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVM 410 K+ +GAKV +DI E G + +G S +V DV++E+ + G L+++ NNAGI G R+ DF R+L +N VF+G + M Sbjct: 25 KLLLGEGAKVAFSDINEAAGQQLAAELG-ERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRL-----EDFSRLLKINTESVFIGCQQGIAAM 127 HSP 2 Score: 36.5798 bits (83), Expect = 7.806e-11 Identity = 17/33 (51.52%), Postives = 22/33 (66.67%), Query Frame = 2 Query: 20 ITRRLEGKVAFITGGASGIGACTCKSLCPTGCQ 118 +T RL+GKVA +TGGASG+G K L G + Sbjct: 1 MTNRLQGKVALVTGGASGVGLEVVKLLLGEGAK 33 The following BLAST results are available for this feature:
BLAST of CF504176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504176 ID=CF504176; Name=CF504176; organism=Citrus sinensis; type=EST; length=414bpback to top |