CF504178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: PLET2_ARATH (AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.807e-27 Identity = 59/131 (45.04%), Postives = 85/131 (64.89%), Query Frame = 1 Query: 61 YRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTL-HKCGRWEARMGQFLGKKYVYLG 420 YRGVT +R TGR+E+H+WD+ G+QVYLGG+D +K+ G NF I +YE ++++M N+T++EFV +RR+S+GF RG+S YRGVT H+ GRW+AR+G+ G K +YLG Sbjct: 191 YRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPSTTTNFPITNYEKEVEEMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLG 321
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: AIL7_ARATH (AP2-like ethylene-responsive transcription factor AIL7 OS=Arabidopsis thaliana GN=AIL7 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.807e-27 Identity = 59/131 (45.04%), Postives = 86/131 (65.65%), Query Frame = 1 Query: 61 YRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTL-HKCGRWEARMGQFLGKKYVYLG 420 YRGVT +R TGR+E+H+WD+ G+QVYLGG+D +K+ G+ A NF + Y +L++M+++TK+EF+ LRR+S+GF RG+S YRGVT H+ GRW+AR+G+ G K +YLG Sbjct: 174 YRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEDRAARAYDLAALKYWGSTATTNFPVSSYSKELEEMNHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLG 304
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: AP2L1_ARATH (AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana GN=At1g16060 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.584e-27 Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 61 YRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTL-HKCGRWEARMGQFLGKKYVYLG 420 +RGVT +R TGR+E+H+WD G+QVYLG +D +K+ G + +NF + +YE+D+K+M + +KEE++ LRR+S+GF RG SKYRGV H GRWEAR+G+ G KY+YLG Sbjct: 59 HRGVTRHRWTGRYEAHLWDKNSWNETQTKKGRQVYLGAYDEEDAAARAYDLAALKYWGRDTILNFPLCNYEEDIKEMESQSKEEYIGSLRRKSSGFSRGVSKYRGVAKHHHNGRWEARIGRVFGNKYLYLG 189
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: PLET1_ARATH (AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.294e-26 Identity = 58/131 (44.27%), Postives = 85/131 (64.89%), Query Frame = 1 Query: 61 YRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTL-HKCGRWEARMGQFLGKKYVYLG 420 YRGVT +R TGR+E+H+WD+ G+QVYLGG+D +K+ G NF I +YE ++++M ++T++EFV +RR+S+GF RG+S YRGVT H+ GRW+AR+G+ G K +YLG Sbjct: 182 YRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARSYDLAALKYWGPSTTTNFPITNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLG 312
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: BBM_ARATH (AP2-like ethylene-responsive transcription factor BBM OS=Arabidopsis thaliana GN=BBM PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 4.916e-26 Identity = 57/131 (43.51%), Postives = 85/131 (64.89%), Query Frame = 1 Query: 61 YRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTL-HKCGRWEARMGQFLGKKYVYLG 420 YRGVT +R TGR+E+H+WD+ G+QVYLGG+D +K+ G NF + +YE ++++M ++T++E+V LRR+S+GF RG+S YRGVT H+ GRW+AR+G+ G K +YLG Sbjct: 211 YRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPLSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLG 341
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: BBM2_BRANA (AP2-like ethylene-responsive transcription factor BBM2 OS=Brassica napus GN=BBM2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.916e-26 Identity = 57/131 (43.51%), Postives = 85/131 (64.89%), Query Frame = 1 Query: 61 YRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTL-HKCGRWEARMGQFLGKKYVYLG 420 YRGVT +R TGR+E+H+WD+ G+QVYLGG+D +K+ G NF + +YE ++++M ++T++E+V LRR+S+GF RG+S YRGVT H+ GRW+AR+G+ G K +YLG Sbjct: 211 YRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPMSEYEKEIEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLG 341
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: BBM1_BRANA (AP2-like ethylene-responsive transcription factor BBM1 OS=Brassica napus GN=BBM1 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.420e-26 Identity = 57/131 (43.51%), Postives = 85/131 (64.89%), Query Frame = 1 Query: 61 YRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTL-HKCGRWEARMGQFLGKKYVYLG 420 YRGVT +R TGR+E+H+WD+ G+QVYLGG+D +K+ G NF + +YE ++++M ++T++E+V LRR+S+GF RG+S YRGVT H+ GRW+AR+G+ G K +YLG Sbjct: 211 YRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPMSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLG 341
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: AP2L3_ARATH (AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thaliana GN=At1g79700 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.644e-23 Identity = 53/121 (43.80%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 61 YRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTL-HKCGRWEARMGQ 390 YRGVT +R TGR+E+H+WD G+QVYLG +D +K+ G + +NF + Y++D+K+M +KEE++ LRR+S+GF RG SKYRGV H GRWEAR+G+ Sbjct: 53 YRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQVYLGAYDEEEAAARAYDLAALKYWGRDTLLNFPLPSYDEDVKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGR 173
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: AIL6_ARATH (AP2-like ethylene-responsive transcription factor AIL6 OS=Arabidopsis thaliana GN=AIL6 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.644e-23 Identity = 54/128 (42.19%), Postives = 81/128 (63.28%), Query Frame = 1 Query: 61 YRGVTFYRRTGRWESHIWDSG-------KQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTL-HKCGRWEARMGQFLGKKYVYLG 420 YRGVT +R TGR+E+H+WD+ ++ GG+D +K+ A A NF I +Y ++++M ++TK+EF+ LRR+S+GF RG+S YRGVT H+ GRW+AR+G+ G K +YLG Sbjct: 269 YRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEDKAARAYDLAALKYWNATATTNFPITNYSKEVEEMKHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLG 396
BLAST of CF504178 vs. ExPASy Swiss-Prot
Match: AP2L4_ARATH (AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana GN=At2g41710 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 5.820e-19 Identity = 52/131 (39.69%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 61 YRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLR-----RQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKY 408 YRGVT +R TGR+E+H+WD GKQVYLG +D +K+ G INF + DY DL++M NL++EE++ LR R+S+GF RG +KYRG+ RW+A + G +Y Sbjct: 71 YRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNLSREEYLASLRRYPFGRKSSGFSRGIAKYRGLQ----SRWDASASRMPGPEY 197 The following BLAST results are available for this feature:
BLAST of CF504178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504178 ID=CF504178; Name=CF504178; organism=Citrus sinensis; type=EST; length=425bpback to top |