CF504182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504182 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.615e-15 Identity = 48/142 (33.80%), Postives = 71/142 (50.00%), Query Frame = 1 Query: 49 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSTPQS-------IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQ 453 A+S I AF+ ++ R + GGR +TP + + PDRP + P +L G PGD+G+D GL++DPE+ N++ E++H RWAMLGA G PE+L+K G+ W+ AG Q Sbjct: 6 ASSTIAAVAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI-LNTPSWYTAGEQ 144
BLAST of CF504182 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.128e-14 Identity = 39/85 (45.88%), Postives = 50/85 (58.82%), Query Frame = 1 Query: 199 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQ 453 PDRP + P +L G PGD+G+D GL +DPE+ N + E++HSRWAMLGA G PE L+K GV W+ AG Q Sbjct: 63 PDRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV-LNTPSWYTAGEQ 144
BLAST of CF504182 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-12 Identity = 32/74 (43.24%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 235 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQI 456 + P+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PE+L G+ WF+AG + Sbjct: 195 EPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL-------GKGAWFEAGDSV 261
BLAST of CF504182 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.601e-11 Identity = 60/148 (40.54%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 46 MATSAIQQSA---FAGQTALRQS---NEFVRKVGVADGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEA--VWFKAG 447 MAT A+ S+ FA + A+RQS VG + G + +TP G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + R L EVI+ R+AMLGA+G + PE L K G+ E WF+ G Sbjct: 1 MATQALVSSSSLTFAAE-AVRQSFRARSLPSSVGCSRKGLVR----AAATPPVKQGGVDRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTG 140 The following BLAST results are available for this feature:
BLAST of CF504182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504182 ID=CF504182; Name=CF504182; organism=Citrus sinensis; type=EST; length=515bpback to top |