CF504204

Overview
NameCF504204
Unique NameCF504204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length213
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:166..378. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK1_PICSI (S-adenosylmethionine synthetase 1 OS=Picea sitchensis GN=METK1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.159e-18
Identity = 41/43 (95.35%), Postives = 43/43 (100.00%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            M+TFLFTSESVNEGHPDKLCDQISDA+LDACLEQDPESKVACE
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACE 43          
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK_PHALU (S-adenosylmethionine synthetase OS=Phaseolus lunatus GN=SAMS PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.820e-18
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 2
Query:   86 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 44          
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.820e-18
Identity = 41/43 (95.35%), Postives = 43/43 (100.00%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            ME+FLFTSESVNEGHPDKLCDQISDA+LDACLEQDPESKVACE
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACE 43          
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK3_VITVI (S-adenosylmethionine synthetase 3 OS=Vitis vinifera GN=METK3 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.820e-18
Identity = 40/43 (93.02%), Postives = 43/43 (100.00%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            M+TFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDPESKVACE
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACE 43          
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.820e-18
Identity = 40/43 (93.02%), Postives = 43/43 (100.00%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            METFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDP+SKVACE
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPDSKVACE 43          
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.820e-18
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 2
Query:   86 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 45          
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.820e-18
Identity = 41/43 (95.35%), Postives = 43/43 (100.00%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            ME+FLFTSESVNEGHPDKLCDQISDA+LDACLEQDPESKVACE
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACE 43          
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.820e-18
Identity = 40/43 (93.02%), Postives = 43/43 (100.00%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            M+TFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDPESKVACE
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACE 43          
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK_GOSHI (S-adenosylmethionine synthetase OS=Gossypium hirsutum GN=SAMS PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.683e-18
Identity = 42/43 (97.67%), Postives = 42/43 (97.67%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            METFLFTSESVNEGHPDKLCDQISDAVLDACL QDPESKVACE
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACE 43          
BLAST of CF504204 vs. ExPASy Swiss-Prot
Match: METK4_VITVI (S-adenosylmethionine synthetase 4 OS=Vitis vinifera GN=METK4 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.683e-18
Identity = 41/43 (95.35%), Postives = 43/43 (100.00%), Query Frame = 2
Query:   83 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACE 211
            M+TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACE
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACE 43          
The following BLAST results are available for this feature:
BLAST of CF504204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 453
Match NameE-valueIdentityDescription
METK1_PICSI2.159e-1895.35S-adenosylmethionine synthetase 1 OS=Picea sitchen... [more]
METK_PHALU2.820e-18100.00S-adenosylmethionine synthetase OS=Phaseolus lunat... [more]
METK4_ARATH2.820e-1895.35S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK3_VITVI2.820e-1893.02S-adenosylmethionine synthetase 3 OS=Vitis vinifer... [more]
METK2_POPTR2.820e-1893.02S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK2_PEA2.820e-18100.00S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK2_BRAJU2.820e-1895.35S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK1_VITVI2.820e-1893.02S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK_GOSHI3.683e-1897.67S-adenosylmethionine synthetase OS=Gossypium hirsu... [more]
METK4_VITVI3.683e-1895.35S-adenosylmethionine synthetase 4 OS=Vitis vinifer... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-692 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504204 ID=CF504204; Name=CF504204; organism=Citrus sinensis; type=EST; length=213bp
GTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCTTAGATCTGC
GCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTTCTATTC
ACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGACCAGAT
CTCTGATGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGAGCAAGG
TTGCCTGTGAGAC
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