CF504216

Overview
NameCF504216
Unique NameCF504216
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length437
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_PHOLL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=metE PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.649e-27
Identity = 64/110 (58.18%), Postives = 74/110 (67.27%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 330
            CY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR +TE + +L+NMV AAK LR
Sbjct:  646 CYCEFNDIMPSIAALDADVITIETSRSDMELLDSF-ENFSYPNEIGPGVYDIHSPNVPSVEWIEALLRKAADRIPVERLWVNPDCGLKTRGWTETRQSLANMVQAAKRLR 754          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_BLOFL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia floridanus GN=metE PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.649e-27
Identity = 58/110 (52.73%), Postives = 77/110 (70.00%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 330
            CYS FN+II  I+ +D DVI+IE+SRSD +LL   +   K    IGPG+YDIHS   PS  EI D++ K+L  +  + LW+NPDCGLKTR + E++ +L+NMV AAK LR
Sbjct:  653 CYSEFNEIIDDILKLDVDVISIESSRSDLQLLQFIKTAGKKLNEIGPGIYDIHSIHQPSINEIMDKLKKLLQYIPKDRLWINPDCGLKTRSWNEIRESLNNMVIAAKTLR 762          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_RHOPT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=metE PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.153e-27
Identity = 64/110 (58.18%), Postives = 75/110 (68.18%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 330
            CYS FNDII +I  MDADVI+IE SRS  +LL  F+   KY   IGPGVYDIHSPR+PS EE+   +      L    LWVNPDCGLKTR + EV+ AL NMV AA+ +R
Sbjct:  675 CYSEFNDIIDAIAAMDADVISIETSRSKMELLDAFKT-YKYPNEIGPGVYDIHSPRVPSVEEMTTLLQLARQRLSDGQLWVNPDCGLKTRGWDEVQGALVNMVEAARQIR 783          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_RHOPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodopseudomonas palustris GN=metE PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.153e-27
Identity = 64/110 (58.18%), Postives = 75/110 (68.18%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 330
            CYS FNDII +I  MDADVI+IE SRS  +LL  F+   KY   IGPGVYDIHSPR+PS EE+   +      L    LWVNPDCGLKTR + EV+ AL NMV AA+ +R
Sbjct:  675 CYSEFNDIIDAIAAMDADVISIETSRSKMELLDAFKT-YKYPNEIGPGVYDIHSPRVPSVEEMTTLLQLARQRLSDGQLWVNPDCGLKTRGWDEVQGALVNMVEAARQIR 783          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_PROMH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Proteus mirabilis (strain HI4320) GN=metE PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.153e-27
Identity = 62/110 (56.36%), Postives = 75/110 (68.18%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 330
            CY  FNDI+ +I  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +P+ E I   + K  + +    LWVNPDCGLKTR ++E + AL+NMV AAK LR
Sbjct:  646 CYCEFNDIMEAIAALDADVITIETSRSDMELLEAF-EHFDYPNEIGPGVYDIHSPNVPNVEWIVGLLRKAQSRIPAERLWVNPDCGLKTRGWSETRAALANMVEAAKYLR 754          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_PASMU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pasteurella multocida GN=metE PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.153e-27
Identity = 63/113 (55.75%), Postives = 75/113 (66.37%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 339
            CYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P  EEI   + K L V+    LWVNPDCGLKTR + E    L  M+   K LR +L
Sbjct:  645 CYSEFNDILPAIAGLDADVITIETSRSDMELLTAFGD-FKYPNDIGPGVYDIHSPRVPKAEEIERLLRKALNVVPKERLWVNPDCGLKTRGWPETIAQLEVMMEVTKKLRAEL 756          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_NEIG1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=metE PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.153e-27
Identity = 62/114 (54.39%), Postives = 76/114 (66.67%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 342
            CYS FNDI+ +I  MDADVITIE SRSD +LL+ F E  KY   IGPGVYDIHSPR+P+  E+   + K + V+    LWVNPDCGLKTR + E    L  M+   + LR +LA
Sbjct:  645 CYSEFNDILPAIAAMDADVITIETSRSDMELLAAFGE-FKYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLEQLQVMMNVTRKLRAELA 757          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_BACP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus pumilus (strain SAFR-032) GN=metE PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.153e-27
Identity = 64/114 (56.14%), Postives = 79/114 (69.30%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 342
            CYSNF DI+ +I D+DADVITIE+SRS    L  + E   Y  G+G GVYDIHSPR+PS EE++  I+  L V  T+  WVNPDCGLKTR+  E   AL NMV AA++ R +LA
Sbjct:  647 CYSNFEDIVDTIEDLDADVITIEHSRSHGGFLD-YLEKHPYLKGLGLGVYDIHSPRVPSVEEMSQIIDDALNVCPTDRFWVNPDCGLKTRQEPETIAALKNMVTAAEVARKKLA 759          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_XYLFT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=metE PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.673e-27
Identity = 62/112 (55.36%), Postives = 76/112 (67.86%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 336
            CYS FNDII ++  +DADVI+IE SRS  +LL  F +  +Y   IGPGVYDIHSPR+P  EE+   + K  AVL    LWVNPDCGLKTR + E + AL  MV AA+ LR +
Sbjct:  648 CYSEFNDIIEAVAALDADVISIETSRSRMELLDAFVK-FRYPNAIGPGVYDIHSPRVPQEEEMVLLLKKARAVLPPEQLWVNPDCGLKTRGWKETRAALQTMVHAAQRLRAE 758          
BLAST of CF504216 vs. ExPASy Swiss-Prot
Match: METE_XYLFM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain M12) GN=metE PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.673e-27
Identity = 62/112 (55.36%), Postives = 76/112 (67.86%), Query Frame = 1
Query:    1 CYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 336
            CYS FNDII ++  +DADVI+IE SRS  +LL  F +  +Y   IGPGVYDIHSPR+P  EE+   + K  AVL    LWVNPDCGLKTR + E + AL  MV AA+ LR +
Sbjct:  648 CYSEFNDIIEAVAALDADVISIETSRSRMELLDAFVK-FRYPNAIGPGVYDIHSPRVPQEEEMVLLLKKARAVLPPEQLWVNPDCGLKTRGWKETRAALQTMVHAAQRLRAE 758          
The following BLAST results are available for this feature:
BLAST of CF504216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_PHOLL1.649e-2758.185-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOFL1.649e-2752.735-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOPT2.153e-2758.185-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOPA2.153e-2758.185-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PROMH2.153e-2756.365-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PASMU2.153e-2755.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIG12.153e-2754.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACP22.153e-2756.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFT3.673e-2755.365-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFM3.673e-2755.365-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-705 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504216 ID=CF504216; Name=CF504216; organism=Citrus sinensis; type=EST; length=437bp
TGCTACTCCAACTTCAACGACATTATCCACTCAATTATCGACATGGATGC
TGATGTGATCACCATTGAGAACTCTCGTTCTGATGAGAAGCTCCTGTCTG
TCTTCCGTGAGGGAGTCAAGTATGGTGCTGGAATTGGCCCTGGTGTGTAT
GACATCCACTCTCCAAGAATACCATCAACTGAAGAAATTGCTGACAGAAT
CAACAAGATGCTTGCTGTGCTAGAAACCAACATTTTGTGGGTTAACCCTG
ACTGTGGTCTTAAGACTCGCAAGTACACTGAGGTGAAGCCAGCCCTCTCA
AACATGGTCGCTGCTGCCAAGCTACTCCGCACCCAGCTTGCCAGTGCCAA
GTGAGTGGTTCTGGAGATTGGAGGGATACTTCCTGAGCCATTGATTTTTT
TTTTTTTCACTTTAAACAAAGAAAGAAAATTCCTGTC
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