CF504218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA5_CAEEL (Proteasome subunit alpha type-5 OS=Caenorhabditis elegans GN=pas-5 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.360e-11 Identity = 32/78 (41.03%), Postives = 51/78 (65.38%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR + FSPEGRLFQVEYA +AVK G TSIG++ + V + +K+ KL+ + ++ + + +++G+ G+ AD Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVK-LGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQHIGVTFAGLIAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 3.360e-11 Identity = 34/79 (43.04%), Postives = 49/79 (62.03%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GY +T FSP G+L Q+EYA AV AAG S+G++ + V + T+KK L D S + PITK++G++ +GM D Sbjct: 5 GYSFSLTTFSPSGKLVQIEYALAAV-AAGAPSVGIKATNGVVLATEKKQKSILYDEQSAHKVEPITKHIGMVYSGMGPD 82
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA4_DICDI (Proteasome subunit alpha type-4 OS=Dictyostelium discoideum GN=psmA4 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.389e-11 Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLD-HTSVTH-LFPITKYLGLLATGMTAD 335 YD+ TIFSPEGR++QVEYA A++ AG T +G+ KD + + +KK KLLD TS++ +F I +++ G+T+D Sbjct: 5 YDQRTTIFSPEGRVYQVEYAMTAIRHAGAT-VGILAKDGIVLAAEKKTTAKLLDSSTSISEKMFKIDEHVVCAVAGITSD 83
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7L_MOUSE (Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.732e-11 Identity = 35/78 (44.87%), Postives = 51/78 (65.38%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AVK G T++G+RG + V + +KK KL D +V + + ++ + G+TAD Sbjct: 5 YDRAITVFSPDGHLFQVEYAQEAVK-KGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTAD 81
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.732e-11 Identity = 35/78 (44.87%), Postives = 51/78 (65.38%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AVK G T++G+RG + V + +KK KL D +V + + ++ + G+TAD Sbjct: 5 YDRAITVFSPDGHLFQVEYAQEAVK-KGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTAD 81
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA4_YEAST (Proteasome component Y13 OS=Saccharomyces cerevisiae GN=PRE9 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.486e-11 Identity = 33/79 (41.77%), Postives = 49/79 (62.03%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDH-TSVTHLFPITKYLGLLATGMTAD 335 YD TIFSPEGRL+QVEYA +++ AG T+IG+ D + + ++KV LL+ TS L+ + + + G+TAD Sbjct: 6 YDSRTTIFSPEGRLYQVEYALESISHAG-TAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTAD 83
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA4_SPIOL (Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.777e-11 Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLD-HTSVTHLFPITKYLGLLATGMTAD 335 YD TIFSPEGRL+QVEYA +A+ AG ++IG+ KD V ++ +KKV KLL TS ++ I ++ G+ +D Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGILAKDGVVLIGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSD 82
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA4_SCHPO (Probable proteasome subunit alpha type-4 OS=Schizosaccharomyces pombe GN=SPAC13C5.01c PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.777e-11 Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLD-HTSVTHLFPITKYLGLLATGMTAD 335 YD TIFSPEGRL+QVEYA +A+ AGV ++G+ KD + + +KKV KLL+ S L+ I + G+TAD Sbjct: 5 YDSRTTIFSPEGRLYQVEYALEAINHAGV-ALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTAD 82
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.777e-11 Identity = 36/79 (45.57%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLD-HTSVTHLFPITKYLGLLATGMTAD 335 YD TIFSPEGRL+QVEYA +A+ AG ++IG+ KD V +V +KKV KLL TS ++ I ++ G+ +D Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGISSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSD 82
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA4_ARATH (Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.777e-11 Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLD-HTSVTHLFPITKYLGLLATGMTAD 335 YD TIFSPEGRL+QVEYA +A+ AG ++IG+ KD V ++ +KKV KLL TS ++ I ++ G+ +D Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSD 82 The following BLAST results are available for this feature:
BLAST of CF504218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504218 ID=CF504218; Name=CF504218; organism=Citrus sinensis; type=EST; length=336bpback to top |