CF504218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.486e-14 Identity = 35/79 (44.30%), Postives = 55/79 (69.62%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I ++G +G+ AD Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVAD 85
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.486e-14 Identity = 35/79 (44.30%), Postives = 55/79 (69.62%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I ++G +G+ AD Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVAD 85
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_METS3 (Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.247e-14 Identity = 36/79 (45.57%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR IT+FSP+GRLFQVEYA +AVK G TSIG++ + + + K+ L++ TS+ +F I +++G +G+ AD Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKIFKIDEHIGAATSGLVAD 85
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA5_TRYBB (Proteasome subunit alpha type-5 OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.247e-14 Identity = 35/78 (44.87%), Postives = 54/78 (69.23%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR + FSPEGR+FQ+EYA +A+K G TS+G++ D+V + +K+VP L+D +SV + I ++G + +GM AD Sbjct: 8 YDRGVNTFSPEGRIFQIEYAIEAIKL-GSTSLGIQTPDAVIIAAEKRVPSTLVDPSSVNKILEIDHHIGTVLSGMVAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.539e-14 Identity = 36/79 (45.57%), Postives = 55/79 (69.62%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S+ +F I ++ +G+ AD Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVR-RGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVAD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.539e-14 Identity = 36/79 (45.57%), Postives = 55/79 (69.62%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S+ +F I ++ +G+ AD Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVR-RGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVAD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_METMJ (Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.539e-14 Identity = 34/79 (43.04%), Postives = 56/79 (70.89%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR IT+FSP+GRL+QVEYA +AVK G T++G++ + V ++ K+V +LL+ S+ +F I ++G+ ++G+ D Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVK-RGTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIEKIFKIDAHIGVASSGLVGD 85
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_METM7 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=psmA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.539e-14 Identity = 36/79 (45.57%), Postives = 55/79 (69.62%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S+ +F I ++ +G+ AD Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVR-RGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVAD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.539e-14 Identity = 36/79 (45.57%), Postives = 55/79 (69.62%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S+ +F I ++ +G+ AD Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVR-RGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVAD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.234e-14 Identity = 37/79 (46.84%), Postives = 55/79 (69.62%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR IT+FSP+GRLFQV+YA +AVK G T++GV+ KD V + +K+V KL++ S +F I ++ ++G+ AD Sbjct: 9 GYDRAITVFSPDGRLFQVQYAREAVK-RGATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAAASSGIIAD 86 The following BLAST results are available for this feature:
BLAST of CF504218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504218 ID=CF504218; Name=CF504218; organism=Citrus sinensis; type=EST; length=336bpback to top |